RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 R3HDM4Q96D70 268 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 C11orf71Q6IPW1 123 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 TMEM88Q6PEY1 159 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 S1PR3Q99500 378 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 RAB1BQ9H0U4 201 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 LOC105371267A0A1B0GV96 52 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 RBMXL2O75526 392 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 HBG1P69891 147 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 HBG2P69892 147 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 HEPN1Q6WQI6 88 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 LILRB2Q8N423 598 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 RSG1Q9BU20 258 aa18.4■□□□□ 0.54
PDLIM2-202ENST00000308354 NDUFA2O43678 99 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 SNAPINO95295 136 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 AKR1C8PQ5T2L2 129 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 SLC25A48Q6ZT89 311 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 CD300LFQ8TDQ1 290 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 FAM216AQ8WUB2 273 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 ZDHHC16Q969W1 377 aa18.39■□□□□ 0.54
PDLIM2-202ENST00000308354 ATF4P18848 351 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 CCL20P78556 96 aa18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 SPINK9Q5DT21 86 aa18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 DDB2Q92466 427 aa18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 PRELID3BQ9Y3B1 194 aa18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 TACC2O95359 2948 aa18.39■□□□□ 0.53
PDLIM2-202ENST00000308354 HPRT1P00492 218 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 IGHV2-70P01814 119 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 PEA15Q15121 130 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 OR8G2PQ6IF36 304 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 TMEM14EPQ6UXP3 125 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 ZNF383Q8NA42 475 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 OR9G9P0C7N8 305 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 DAOP14920 347 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 SPSB3Q6PJ21 355 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 CBLN2Q8IUK8 224 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 LFNGQ8NES3 379 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 OR4C12Q96R67 309 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 GAB2Q9UQC2 676 aa18.38■□□□□ 0.53
PDLIM2-202ENST00000308354 PRB1P04280 392 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 H2AFB1P0C5Y9 115 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 AGAP20933 346 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 OR2B8PP59922 312 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 SLC38A11Q08AI6 406 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 SMUG1Q53HV7 270 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 SCGB1C1Q8TD33 95 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 DTD1Q8TEA8 209 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 FLNCQ14315 2725 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 MALRD1Q5VYJ5 2156 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 DLX1P56177 255 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 PRB3Q04118 309 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 UBTD1Q9HAC8 227 aa18.37■□□□□ 0.53
PDLIM2-202ENST00000308354 CDKN1AP38936 164 aa18.36■□□□□ 0.53
PDLIM2-202ENST00000308354 ZNF841Q6ZN19 808 aa18.36■□□□□ 0.53
PDLIM2-202ENST00000308354 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-202ENST00000308354 PBDC1Q9BVG4 233 aa18.36■□□□□ 0.53
PDLIM2-202ENST00000308354 PPIHO43447 177 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 TMEM30BQ3MIR4 351 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 TMEM155Q4W5P6 130 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 RARRES2Q99969 163 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 QTRT1Q9BXR0 403 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 TET2Q6N021 2002 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 AKAP6Q13023 2319 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 UBE2L5PA0A1B0GUS4 154 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 DLX6P56179 175 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 LRRC75BQ2VPJ9 315 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 OR10A7Q8NGE5 316 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 SFT2D1Q8WV19 159 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 KPTNQ9Y664 436 aa18.35■□□□□ 0.53
PDLIM2-202ENST00000308354 TRAV3A0A0B4J244 114 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 NDUFS7O75251 213 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 CT45A6P0DMU7 189 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 CT45A5P0DMU8 189 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 CT45A7P0DMV0 189 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 REG1BP48304 166 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 RBFOX2O43251 390 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 THBS3P49746 956 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 RPS16P62249 146 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 DTX2Q86UW9 622 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 C11orf42Q8N5U0 333 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 CLRN3Q8NCR9 226 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 OR4S2Q8NH73 311 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 WDR61Q9GZS3 305 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 VSIRQ9H7M9 311 aa18.34■□□□□ 0.53
PDLIM2-202ENST00000308354 CEBPZOSA8MTT3 80 aa18.33■□□□□ 0.53
PDLIM2-202ENST00000308354 NQO2P16083 231 aa18.33■□□□□ 0.53
PDLIM2-202ENST00000308354 TLE4Q04727 773 aa18.33■□□□□ 0.53
PDLIM2-202ENST00000308354 DIAPH2-AS1Q14236 149 aa18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 SP5Q6BEB4 398 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 DHRS7BQ6IAN0 325 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 DPPA3Q6W0C5 159 aa18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 RPRMQ9NS64 109 aa18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 TMEM140Q9NV12 185 aa18.33■□□□□ 0.52
PDLIM2-202ENST00000308354 A0A1B0GW64 132 aa18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 IGKV1-16P04430 117 aa18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 KIR2DS2P43631 304 aa18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 ERVK-16P61578 105 aa18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 BBC3Q96PG8 261 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 PSMG3Q9BT73 122 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-202ENST00000308354 BTBD17A6NE02 478 aa18.31■□□□□ 0.52
PDLIM2-202ENST00000308354 PMS2P5A8MQ11 134 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms