RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PLSCR4Q9NRQ2 329 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 COA4Q9NYJ1 87 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 OBSL1O75147 1896 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 C17orf98A8MV24 154 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 SLC25A17O43808 307 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 KBTBD11O94819 623 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 MEF2BQ02080 365 aaPredicted RBP9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF273Q14593 569 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 SIGLECL1Q8N7X8 197 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 IGHV3-21A0A0B4J1V1 117 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 PPIAL4CA0A0B4J2A2 164 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 PPIAL4GP0DN37 164 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 KIAA1671Q9BY89 1806 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 CEACAM18A8MTB9 384 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 MIC13Q5XKP0 118 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMEM186Q96B77 213 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 PTBP3O95758 552 aaKnown RBP9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 FOSL1P15407 271 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 SPACA3Q8IXA5 215 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR4C13Q8NGP0 309 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 PERPQ96FX8 193 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 CLCF1Q9UBD9 225 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 SERTM2A0A1B0GWG4 89 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 C17orf100A8MU93 164 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 USF1P22415 310 aaPredicted RBP9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 HGFACQ04756 655 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 RNFT1Q5M7Z0 435 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 RTN4RL2Q86UN3 420 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 CACNA1BQ00975 2339 aa9.62□□□□□ -0.87
PCDHGC3-201ENST00000308177 KBTBD11-OT1A0A1B0GTJ5 212 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 HELTA6NFD8 242 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 F8VVB4 439 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 F8VWA3 439 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 EIF3GO75821 320 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 CFPP27918 469 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF880Q6PDB4 577 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM216AQ8WUB2 273 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 STARD4Q96DR4 205 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 C18orf12Q96KH6 178 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 QTRT1Q9BXR0 403 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 MRPL37Q9BZE1 423 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 RALYQ9UKM9 306 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 E9PLN8 166 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 H0Y8G0 127 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 AP4M1O00189 453 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 FCN1O00602 326 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 FABP4P15090 132 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 HCP5Q6MZN7 132 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR10D4PQ8NGN7 298 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 MIOXQ9UGB7 285 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 ARF6P62330 175 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 C1QTNF12Q5T7M4 302 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 RARRES2Q99969 163 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 TM4SF5O14894 197 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 IGHG3P01860 377 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 TIMP3P35625 211 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 SUMO1P63165 101 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 RPEL1Q2QD12 228 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 Q8WTZ3 238 aa9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 WDR61Q9GZS3 305 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-201ENST00000308177 SELENOTP62341 195 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 SCGB2A2Q13296 93 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM162BQ5T6X4 162 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMEM204Q9BSN7 226 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMPRSS5Q9H3S3 457 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 MUC6Q6W4X9 2439 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 DLL1O00548 723 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 HSBP1O75506 76 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 LINC00869P0C866 280 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 HTR1DP28221 377 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 TECTAO75443 2155 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 TFF1P04155 84 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZCCHC14Q8WYQ9 949 aaKnown RBP9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 TXN2Q99757 166 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 CLEC7AQ9BXN2 247 aa9.6□□□□□ -0.87
PCDHGC3-201ENST00000308177 A8MXK9 166 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 ZNF146Q15072 292 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 TXNDC17Q9BRA2 123 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 PARD6AQ9NPB6 346 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 KIAA1324LA8MWY0 1029 aaPredicted RBP9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 M0QZ24 198 aa9.59□□□□□ -0.87
PCDHGC3-201ENST00000308177 HYPMO75409 117 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms