RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 GSN-AS1Q9NRJ2 163 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-201ENST00000306085 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 SFTPCP11686 197 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 LEPP41159 167 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-201ENST00000306085 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 CRYBB3P26998 211 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
TRIM56-201ENST00000306085 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 GCM2O75603 506 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-201ENST00000306085 TMEM42Q69YG0 159 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 ATP5LO75964 103 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 SELENOTP62341 195 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF645Q8N7E2 425 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
TRIM56-201ENST00000306085 C10orf35Q96D05 121 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-201ENST00000306085 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
TRIM56-201ENST00000306085 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-201ENST00000306085 TET1Q8NFU7 2136 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 MAGEA5P43359 124 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 NPIPB4C9JG80 1138 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 DEFB124Q8NES8 71 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF124Q15973 351 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 TMEM171Q8WVE6 324 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 ITGB4P16144 1822 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 PEX7O00628 323 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 C17orf99Q6UX52 265 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 WDR82Q6UXN9 313 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
TRIM56-201ENST00000306085 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-201ENST00000306085 TMEM229AB2RXF0 380 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF585BQ52M93 769 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 MGST2Q99735 147 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 RPL36A-HNRNPH2H7BZ11 118 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 CTDSPLO15194 276 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
TRIM56-201ENST00000306085 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 HOXD3P31249 432 aaPredicted RBP11.59□□□□□ -0.55
TRIM56-201ENST00000306085 SORL1Q92673 2214 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 PHF7Q9BWX1 381 aaPredicted RBP11.59□□□□□ -0.55
TRIM56-201ENST00000306085 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF107Q9UII5 783 aaPredicted RBP11.59□□□□□ -0.55
TRIM56-201ENST00000306085 TJP1Q07157 1748 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 MALRD1Q5VYJ5 2156 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 PRR35P0CG20 571 aa11.59□□□□□ -0.55
TRIM56-201ENST00000306085 DCAF10Q5QP82 559 aa11.58□□□□□ -0.55
TRIM56-201ENST00000306085 C1orf185Q5T7R7 199 aa11.58□□□□□ -0.55
TRIM56-201ENST00000306085 KLK13Q9UKR3 277 aa11.58□□□□□ -0.55
TRIM56-201ENST00000306085 IGHV3OR16-13A0A075B7E8 117 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3-74A0A0B4J1X5 117 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 PCMT1P22061 227 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 CCL8P80075 99 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 LDLRAD2Q5SZI1 272 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 TPRX1Q8N7U7 411 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 VGLL1Q99990 258 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 LILRA5A6NI73 299 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 PROB1E7EW31 1015 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 SF3B6Q9Y3B4 125 aaKnown RBP11.58□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3-49A0A0A0MS15 119 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 H0Y980 276 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 SRFP11831 508 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 CCL13Q99616 98 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 V9GYH0 126 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 PTPRDP23468 1912 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 GPR183P32249 361 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 NPC2P61916 151 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 CD69Q07108 199 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 VKORC1Q9BQB6 163 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 CCL21O00585 134 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV5-51A0A0C4DH38 117 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 ASIPP42127 132 aa11.58□□□□□ -0.56
TRIM56-201ENST00000306085 CISD1Q9NZ45 108 aaKnown RBP11.58□□□□□ -0.56
TRIM56-201ENST00000306085 ZIC3O60481 467 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 GLIPR1P48060 266 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 A0A1W2PP11 408 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 GATD1Q8NB37 220 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 PLNP26678 52 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 PRSS41Q7RTY9 318 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
TRIM56-201ENST00000306085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms