RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GMPPAQ96IJ6 420 aaPredicted RBP11.02□□□□□ -0.65
TRIM35-201ENST00000305364 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 OCIAD1Q9NX40 245 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 IGLV3-32A0A0A0MS00 114 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 KLRC4-KLRK1H3BQV0 150 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 J3QT63 122 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 NUPR1O60356 82 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
TRIM35-201ENST00000305364 TDRG1Q3Y452 100 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 ERASQ7Z444 233 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 TUSC5Q8IXB3 177 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 SAXO1Q8IYX7 474 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 OR5B3Q8NH48 314 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 PRDM14Q9GZV8 571 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 TWSG1Q9GZX9 223 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
TRIM35-201ENST00000305364 M0R1X1 148 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 RAMP3O60896 148 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 PLA2G5P39877 138 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 SLC25A45Q8N413 288 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 TPRX1Q8N7U7 411 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 FSCN3Q9NQT6 498 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 PCDH15Q96QU1 1955 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 IL18BPO95998 194 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 AESQ08117 197 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 FOXL1Q12952 345 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 LINC00596Q86U02 117 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 TMEM178AQ8NBL3 297 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 LRFN3Q9BTN0 628 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 C11orf1Q9H5F2 150 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 THADAQ6YHU6 1953 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 A0A1W2PR77 199 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
TRIM35-201ENST00000305364 IGFBP7Q16270 282 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 Q6ZWC4 215 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 ARL6IP6Q8N6S5 226 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 HSD17B10Q99714 261 aaKnown RBP11.01□□□□□ -0.65
TRIM35-201ENST00000305364 LOXL2Q9Y4K0 774 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 TMEM265A0A087WTH1 108 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 Q8IYB0 196 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 C20orf144Q9BQM9 153 aa11.01□□□□□ -0.65
TRIM35-201ENST00000305364 TRAV24A0A0B4J272 114 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 KIR2DL5BA0A0G2JN68 375 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 KIR2DL5BA0A0G2JPC4 375 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 TYMSP04818 313 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 SLC23A3Q6PIS1 610 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 PQLC2Q6ZP29 291 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 ODF3L1Q8IXM7 274 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 KIR2DL5AQ8N109 375 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 DNPH1O43598 174 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 ACSF3Q4G176 576 aaPredicted RBP11□□□□□ -0.65
TRIM35-201ENST00000305364 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
TRIM35-201ENST00000305364 SH2D2AQ9NP31 389 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 CLEC1BQ9P126 229 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 WASHC3Q9Y3C0 194 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 CACNA1BQ00975 2339 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 EPOPA6NHQ4 379 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 CRYABP02511 175 aaKnown RBP11□□□□□ -0.65
TRIM35-201ENST00000305364 APCSP02743 223 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 ST6GALNAC3Q8NDV1 305 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 S1PR3Q99500 378 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
TRIM35-201ENST00000305364 C17orf98A8MV24 154 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 MT-ND6P03923 174 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 RIPPLY2Q5TAB7 128 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 PCSK4Q6UW60 755 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 ZNF645Q8N7E2 425 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 C1QTNF5Q9BXJ0 243 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 IGKV1-39P01597 117 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 IGKV1D-39P04432 117 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 TIMP3P35625 211 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 PDLIM4P50479 330 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 CCL11P51671 97 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 USF3Q68DE3 2245 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 TOX4O94842 621 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 GAGE1Q13065 139 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 TRIB1Q96RU8 372 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
TRIM35-201ENST00000305364 DEPPQ9NTK1 212 aa10.99□□□□□ -0.65
TRIM35-201ENST00000305364 HAND1O96004 215 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 CRYBB3P26998 211 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 EPHA8P29322 1005 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-201ENST00000305364 ZBTB34Q8NCN2 500 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 HBZP02008 142 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 TAS2R45P59539 299 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 ABHD12Q8N2K0 398 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 IGLV3-12A0A075B6K2 115 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 IGHV5-10-1A0A0J9YXX1 117 aa10.98□□□□□ -0.65
TRIM35-201ENST00000305364 ETV2O00321 342 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-201ENST00000305364 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-201ENST00000305364 CLDN14O95500 239 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms