RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 STRAPQ9Y3F4 350 aaKnown RBP11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 J3QR06 171 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 FSTL3O95633 263 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 MIDNQ504T8 468 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 NARS2Q96I59 477 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 TSNAXQ99598 290 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 ATP5SQ99766 215 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF98A6NK75 572 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 OR9G9P0C7N8 305 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF251Q9BRH9 671 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 QTRT1Q9BXR0 403 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 HRH4Q9H3N8 390 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 SHOXO15266 292 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 CAMLGP49069 296 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
SHCBP1-201ENST00000303383 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 P0C879 139 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 SULT1A2P50226 295 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 TOR2AQ5JU69 321 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 OR2G3Q8NGZ4 309 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 DDB2Q92466 427 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 TMEM133Q9H2Q1 129 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 CACFD1Q9UGQ2 172 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 SCO1O75880 301 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 PRRX1P54821 245 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 OR13D1Q8NGV5 346 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 HIPK2Q9H2X6 1198 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 FGF16O43320 207 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 DHRS7BQ6IAN0 325 aaPredicted RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 TGIF2LXQ8IUE1 241 aa11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
SHCBP1-201ENST00000303383 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 LIPFP07098 398 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 HOXA1P49639 335 aaPredicted RBP11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 Q6ZRG5 221 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 IFNA10P01566 189 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 COX7A1P24310 79 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF841Q6ZN19 808 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 LRBAP50851 2863 aa11.86□□□□□ -0.51
SHCBP1-201ENST00000303383 ATP6V0CP27449 155 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 SPCS3P61009 180 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 SLC38A11Q08AI6 406 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF833PQ6ZTB9 187 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 SSBP3Q9BWW4 388 aaPredicted RBP11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 SMG1Q96Q15 3661 aaKnown RBP11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 SPP1P10451 314 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 OR4A47Q6IF82 309 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 NDUFS7O75251 213 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 F12P00748 615 aaPredicted RBP11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 TMEM11P17152 192 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 EFNA4P52798 201 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 DLX6P56179 175 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 ARV1Q9H2C2 271 aa11.85□□□□□ -0.51
SHCBP1-201ENST00000303383 LY86O95711 162 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 RAB5CP51148 216 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 RPS16P62249 146 aaKnown RBP11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 CLEC7AQ9BXN2 247 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 LOC105371242A0A075B767 164 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 FAM213BQ8TBF2 198 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 MYO18BQ8IUG5 2567 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 CLN5O75503 358 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 TSPAN15O95858 294 aa11.84□□□□□ -0.51
SHCBP1-201ENST00000303383 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms