RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TRGV3P03979 118 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 FAM219BQ5XKK7 198 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 UPK3AO75631 287 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CTAG1AP78358 180 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 ZNF826PQ6ZT77 177 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 LINC01587Q99440 93 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 MRPL32Q9BYC8 188 aaKnown RBP8.93□□□□□ -0.98
CLIP1-201ENST00000302528 MIXL1Q9H2W2 232 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 DPRXA6NFQ7 191 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV4-39P01824 125 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CA7P43166 264 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 PDLIM4P50479 330 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 FOXA3P55318 350 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CKS1BP61024 79 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CD300CQ08708 224 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 FAM214BQ7L5A3 538 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
CLIP1-201ENST00000302528 ASXL3Q9C0F0 2248 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 PSG4Q00888 419 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 SSC4DQ8WTU2 575 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM74BQ9NUR3 256 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 EVPLQ92817 2033 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 ZNF688P0C7X2 276 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 NIT1Q86X76 327 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 OR9G1Q8NH87 305 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-66A0A0C4DH42 116 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV5-10-1A0A0J9YXX1 117 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 PGLYRP1O75594 196 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 CLPPQ16740 277 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 PEAR1Q5VY43 1037 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 WDR82Q6UXN9 313 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 GPR146Q96CH1 333 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 VGLL1Q99990 258 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 MRPS18BQ9Y676 258 aaKnown RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 PTPRZ1P23471 2315 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 ODAMA1E959 279 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 LINC00614P0C842 121 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 TDGF1P3P51864 188 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB3Q92617 1050 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 NABP2Q9BQ15 211 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 CLEC7AQ9BXN2 247 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 ZG16O60844 167 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 DXOO77932 396 aaKnown RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 NDUFA3O95167 84 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 VAX1Q5SQQ9 334 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 ZNF600Q6ZNG1 722 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 SDHCQ99643 169 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-201ENST00000302528 CCL19Q99731 98 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 CLDN16Q9Y5I7 305 aa8.92□□□□□ -0.98
CLIP1-201ENST00000302528 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 LTBP4Q8N2S1 1624 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 APOHP02749 345 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 ICAM4Q14773 271 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 ACSF3Q4G176 576 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 FAM27BQ5VT28 67 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 LOC390937A0A1W2PQ73 354 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 MOSP00540 346 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 CRPP02741 224 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 ISXQ2M1V0 245 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 DCAF12L2Q5VW00 463 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 SAMD13Q5VXD3 122 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 LHX8Q68G74 356 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 VKORC1L1Q8N0U8 176 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 PNKDQ8N490 385 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 ALX4Q9H161 411 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 MARCH11A6NNE9 402 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 HRKO00198 91 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-48P01763 117 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 SRSF6Q13247 344 aaKnown RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 WNT10AQ9GZT5 417 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 RNF115Q9Y4L5 304 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 FAM90A26D6RGX4 464 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 EIF3GO75821 320 aaKnown RBP eCLIP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 CENPWQ5EE01 88 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM42Q69YG0 159 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 LINC00305Q7Z4B0 112 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 PUSL1Q8N0Z8 303 aaKnown RBP8.91□□□□□ -0.98
CLIP1-201ENST00000302528 LEAP2Q969E1 77 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM186Q96B77 213 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 ATAD5Q96QE3 1844 aa8.91□□□□□ -0.98
CLIP1-201ENST00000302528 A0A0U1RQV5 110 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 HOXA3O43365 443 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-23P01764 117 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 TNFRSF9Q07011 255 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 FGF11Q92914 225 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 SFXN3Q9BWM7 321 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 WDR54Q9H977 334 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 PEX7O00628 323 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 GCM2O75603 506 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-201ENST00000302528 CD8AP01732 235 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 CISD3P0C7P0 127 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 TSPAN7P41732 249 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 FOCADQ5VW36 1801 aa8.9□□□□□ -0.98
CLIP1-201ENST00000302528 PLA2G10O15496 165 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms