RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 IFITM10A6NMD0 228 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 HAPLN4Q86UW8 402 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 OR1L1Q8NH94 360 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 ZG16O60844 167 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 RELQ04864 619 aaPredicted RBP18.32■□□□□ 0.52
NHLH1-201ENST00000302101 OR13A1Q8NGR1 328 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 PPP1R35Q8TAP8 253 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 GALMQ96C23 342 aa18.32■□□□□ 0.52
NHLH1-201ENST00000302101 LIN7CQ9NUP9 197 aaKnown RBP18.32■□□□□ 0.52
NHLH1-201ENST00000302101 TRBV23-1A0A0A0MS06 115 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 CEACAM6P40199 344 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 CDX1P47902 265 aaPredicted RBP18.31■□□□□ 0.52
NHLH1-201ENST00000302101 C4orf17Q53FE4 359 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 SPANXN5Q5MJ07 72 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 RCC1LQ96I51 464 aaKnown RBP18.31■□□□□ 0.52
NHLH1-201ENST00000302101 MS4A5Q9H3V2 200 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 USF3Q68DE3 2245 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 SPTBN1Q01082 2364 aaKnown RBP18.31■□□□□ 0.52
NHLH1-201ENST00000302101 GATCO43716 136 aaKnown RBP18.31■□□□□ 0.52
NHLH1-201ENST00000302101 HBG1P69891 147 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 HBG2P69892 147 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 ZNF585BQ52M93 769 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 OR10G4Q8NGN3 311 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 EDARADDQ8WWZ3 215 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 DCTN5Q9BTE1 182 aa18.31■□□□□ 0.52
NHLH1-201ENST00000302101 IGSF10Q6WRI0 2623 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 LRRC30A6NM36 301 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 DEFB108AA8MXU0 73 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 B9A039 149 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 MGST3O14880 152 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BKO60814 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HBZP02008 142 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 TRGC2P03986 189 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BJP06899 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BOP23527 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 IL2RGP31785 369 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BBP33778 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 ELLP55199 621 aaPredicted RBP18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BDP58876 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BCP62807 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 PAX5Q02548 391 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 EFNB3Q15768 340 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST2H2BEQ16778 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.3■□□□□ 0.52
NHLH1-201ENST00000302101 SPNS3Q6ZMD2 512 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BHQ93079 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BNQ99877 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 HIST1H2BMQ99879 126 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 DOCK11Q5JSL3 2073 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 IGHV2-70P01814 119 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 RD3LP0DJH9 198 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 SSTR5P35346 364 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 STUMQ69YW2 141 aa18.3■□□□□ 0.52
NHLH1-201ENST00000302101 S100A2P29034 98 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 HNF4GQ14541 408 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 PSMG3Q9BT73 122 aaPredicted RBP18.29■□□□□ 0.52
NHLH1-201ENST00000302101 ABCA4P78363 2273 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 CACNA1BQ00975 2339 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 GYPAP02724 150 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 WNT2P09544 360 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 RNF224P0DH78 156 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 DUX4L9Q6RFH8 374 aaPredicted RBP18.29■□□□□ 0.52
NHLH1-201ENST00000302101 CCL17Q92583 94 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 LURAP1Q96LR2 239 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 RNF150Q9ULK6 438 aa18.29■□□□□ 0.52
NHLH1-201ENST00000302101 UBE2L5PA0A1B0GUS4 154 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 B4DEV8 164 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 EDDM3BP56851 147 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 LRRC75BQ2VPJ9 315 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 ZNF672Q499Z4 452 aaPredicted RBP18.28■□□□□ 0.52
NHLH1-201ENST00000302101 MUC15Q8N387 334 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 RFESDQ8TAC1 157 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 GAR1Q9NY12 217 aaKnown RBP18.28■□□□□ 0.52
NHLH1-201ENST00000302101 LRBAP50851 2863 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 ODAMA1E959 279 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 CEBPZOSA8MTT3 80 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 PYY3Q5JQD4 70 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 TEX36Q5VZQ5 186 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 OR8G2PQ6IF36 304 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 FAM53AQ6NSI3 398 aaPredicted RBP18.28■□□□□ 0.52
NHLH1-201ENST00000302101 DRAM1Q8N682 238 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 OR52L2PQ8NGH6 319 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 SDSLQ96GA7 329 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 CCL13Q99616 98 aa18.28■□□□□ 0.52
NHLH1-201ENST00000302101 CLDN14O95500 239 aa18.27■□□□□ 0.52
NHLH1-201ENST00000302101 LOXP28300 417 aaPredicted RBP18.27■□□□□ 0.52
NHLH1-201ENST00000302101 PDZD11Q5EBL8 140 aa18.27■□□□□ 0.52
NHLH1-201ENST00000302101 C1orf87Q8N0U7 546 aa18.27■□□□□ 0.52
NHLH1-201ENST00000302101 MBD3L1Q8WWY6 194 aa18.27■□□□□ 0.52
NHLH1-201ENST00000302101 OR4C12Q96R67 309 aa18.27■□□□□ 0.52
NHLH1-201ENST00000302101 WDR61Q9GZS3 305 aaKnown RBP18.27■□□□□ 0.52
NHLH1-201ENST00000302101 MAP1LC3B2A6NCE7 125 aa18.27■□□□□ 0.51
NHLH1-201ENST00000302101 PNRC1Q12796 327 aaPredicted RBP18.27■□□□□ 0.51
NHLH1-201ENST00000302101 FAM210BQ96KR6 192 aa18.27■□□□□ 0.51
NHLH1-201ENST00000302101 MAP1LC3BQ9GZQ8 125 aa18.27■□□□□ 0.51
NHLH1-201ENST00000302101 USP24Q9UPU5 2620 aa18.27■□□□□ 0.51
NHLH1-201ENST00000302101 SERF2P84101 59 aa18.26■□□□□ 0.51
NHLH1-201ENST00000302101 ITLN2Q8WWU7 325 aaPredicted RBP18.26■□□□□ 0.51
NHLH1-201ENST00000302101 GAFA1Q96PS6 74 aa18.26■□□□□ 0.51
NHLH1-201ENST00000302101 TMEM41BQ5BJD5 291 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms