RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 K7ESF4 209 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 SELLP14151 372 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
CASC4-201ENST00000299957 OR5I1Q13606 314 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 GGNQ86UU5 652 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 OR13A1Q8NGR1 328 aa11.25□□□□□ -0.61
CASC4-201ENST00000299957 A0A1B0GUS0 222 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 AGAP20933 346 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 RHOBP62745 196 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
CASC4-201ENST00000299957 TNFAIP6P98066 277 aaPredicted RBP11.24□□□□□ -0.61
CASC4-201ENST00000299957 Q0VFX4 171 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 OR2V2Q96R30 315 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 HRASP01112 189 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 CISD2Q8N5K1 135 aaKnown RBP11.24□□□□□ -0.61
CASC4-201ENST00000299957 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 KLK10O43240 276 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 CA11O75493 328 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 CRYBB3P26998 211 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 CASP6P55212 293 aa11.24□□□□□ -0.61
CASC4-201ENST00000299957 ZNF703Q9H7S9 590 aaPredicted RBP11.24□□□□□ -0.61
CASC4-201ENST00000299957 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
CASC4-201ENST00000299957 UBE2CO00762 179 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 REG1AP05451 166 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 CHRNB4P30926 498 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 MOB3BQ86TA1 216 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 HES4Q9HCC6 221 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 HELTA6NFD8 242 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 PSPNO60542 156 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 KLF3P57682 345 aaPredicted RBP11.23□□□□□ -0.61
CASC4-201ENST00000299957 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 RPP25LQ8N5L8 163 aaKnown RBP11.23□□□□□ -0.61
CASC4-201ENST00000299957 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 DMRT1Q9Y5R6 373 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 IGKV1-6A0A0C4DH72 117 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 LNP1A1A4G5 178 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 J3QR06 171 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 CTSSP25774 331 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 OR10J1P30954 320 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 TRIP6Q15654 476 aaKnown RBP11.23□□□□□ -0.61
CASC4-201ENST00000299957 WDYHV1Q96HA8 205 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 SH2D2AQ9NP31 389 aa11.23□□□□□ -0.61
CASC4-201ENST00000299957 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 TAS2R45P59539 299 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 PQLC2Q6ZP29 291 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 TMEM56Q96MV1 263 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 WIPI2Q9Y4P8 454 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 KBTBD11O94819 623 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 SRSF4Q08170 494 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 VAMP3Q15836 100 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 RPL30P62888 115 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 Q6ZN92 141 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 FAM214BQ7L5A3 538 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 ERASQ7Z444 233 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 ZPBPQ9BS86 351 aa11.22□□□□□ -0.61
CASC4-201ENST00000299957 CISD1Q9NZ45 108 aaKnown RBP11.22□□□□□ -0.61
CASC4-201ENST00000299957 TRAV17A0A0B4J275 112 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 M0R143 59 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 CHEK1O14757 476 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 IGKV1-5P01602 117 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 RBP4P02753 201 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
CASC4-201ENST00000299957 MFAP2P55001 183 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 RPL23P62829 140 aaKnown RBP11.21□□□□□ -0.61
CASC4-201ENST00000299957 Q56UQ5 140 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 OR4S2Q8NH73 311 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 RAB9BQ9NP90 201 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 FOSL1P15407 271 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.61
CASC4-201ENST00000299957 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 TEPPQ6URK8 271 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 MED12LQ86YW9 2145 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 ZNF645Q8N7E2 425 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 HARBI1Q96MB7 349 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 EYSQ5T1H1 3165 aa11.21□□□□□ -0.61
CASC4-201ENST00000299957 NKX6-3A6NJ46 265 aa11.21□□□□□ -0.62
CASC4-201ENST00000299957 SMDT1Q9H4I9 107 aa11.21□□□□□ -0.62
CASC4-201ENST00000299957 METRNQ9UJH8 293 aa11.21□□□□□ -0.62
CASC4-201ENST00000299957 FREM2Q5SZK8 3169 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms