RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 ANKRD55Q3KP44 614 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 C19orf35Q6ZS72 473 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 C9orf139Q6ZV77 190 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 SPAG16Q8N0X2 631 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 CENPSQ8N2Z9 138 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 Q8N6K4 173 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 DEDD2Q8WXF8 326 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 HARBI1Q96MB7 349 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 CLCC1Q96S66 551 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 S1PR3Q99500 378 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 C7orf50Q9BRJ6 194 aaKnown RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 FBXL15Q9H469 300 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 PIPOXQ9P0Z9 390 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 COPZ2Q9P299 210 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 CDC42EP3Q9UKI2 254 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 GAB2Q9UQC2 676 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 TCF19Q9Y242 345 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 WASHC3Q9Y3C0 194 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 MAP1AP78559 2803 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 hCG_2014768A0A024R1R8 64 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 TEX13DA0A0J9YY54 714 aaPredicted RBP5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 CRYM-AS1A6NIL9 109 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 CENPXA8MT69 81 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 MPPED1O15442 326 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC25A17O43808 307 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 GPR137BO60478 399 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1-5P01602 117 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 APOA2P02652 100 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 FAM157CP0CG43 387 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 SAA1P0DJI8 122 aaPredicted RBP5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 APELAP0DMC3 54 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 G6PCP35575 357 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 CEACAM3P40198 252 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 IER3P46695 156 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 UCP3P55916 312 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 RND3P61587 244 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 UBA52P62987 128 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 DEFA5Q01523 94 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 PJVKQ0ZLH3 352 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 TMEM187Q14656 261 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 MMDQ15546 238 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 RGS21Q2M5E4 152 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 C2orf68Q2NKX9 166 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 TRIM16LQ309B1 348 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 SPINK9Q5DT21 86 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 C9orf152Q5JTZ5 239 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 FAM71F2Q6NXP2 309 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 MZT2BQ6NZ67 158 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 Q6YL49 198 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 PRIMA1Q86XR5 153 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 OR8H3Q8N146 312 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 MINDY2Q8NBR6 621 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 OR5AN1Q8NGI8 311 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 CHPT1Q8WUD6 406 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 MALSU1Q96EH3 234 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 HSPB9Q9BQS6 159 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC25A33Q9BSK2 321 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 NSG2Q9Y328 171 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 ZANQ9Y493 2812 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 HIVEP2P31629 2446 aa5.16□□□□□ -1.58
DEPDC4-201ENST00000299185 ATRQ13535 2644 aa5.15□□□□□ -1.58
DEPDC4-201ENST00000299185 VPS13CQ709C8 3753 aa5.15□□□□□ -1.58
DEPDC4-201ENST00000299185 C3orf85A0A1B0GTC6 90 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 LINC01548A6NM66 108 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 FAM90A9PA6NNJ1 464 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 INMT-MINDY4F8WBC2 141 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 H0Y980 276 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 ADAP1O75689 374 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 SFT2D2O95562 160 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 PTTG1O95997 202 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 MOSP00540 346 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 HLA-AP01891 365 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OPN1MWP04001 364 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 AMY1AP04745 511 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OR9G9P0C7N8 305 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OPN1MW2P0DN77 364 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OPN1MW3P0DN78 364 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 F2RP25116 425 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 RPS16P62249 146 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 GNB1P62873 340 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 SSBP2P81877 361 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 CATR1Q13166 79 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 DHRS2Q13268 280 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OXA1LQ15070 435 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 PSG5Q15238 335 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 SURF2Q15527 256 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 MRGPRG-AS1Q2M3A8 158 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 C4orf46Q504U0 113 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM268Q5VZI3 342 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF66Q6ZN08 573 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 CCDC71LQ8N9Z2 235 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 OR4S2Q8NH73 311 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 ZFAND1Q8TCF1 268 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 R3HDM4Q96D70 268 aa5.15□□□□□ -1.59
DEPDC4-201ENST00000299185 HSD17B10Q99714 261 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms