RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 TMEM11P17152 192 aa12.96□□□□□ -0.34
NPM1-201ENST00000296930 DIAPH2-AS1Q14236 149 aa12.96□□□□□ -0.34
NPM1-201ENST00000296930 OR2AK2Q8NG84 335 aa12.96□□□□□ -0.34
NPM1-201ENST00000296930 OR2D2Q9H210 308 aa12.96□□□□□ -0.34
NPM1-201ENST00000296930 CRYM-AS1A6NIL9 109 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 SNRPGP15A8MWD9 76 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
NPM1-201ENST00000296930 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
NPM1-201ENST00000296930 CT45A1Q5HYN5 189 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 KHDC1LQ5JSQ8 128 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 LYG2Q86SG7 212 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 C5orf56Q8N8D9 126 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 BVESQ8NE79 360 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 CT45A3Q8NHU0 189 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 OR51J1Q9H342 316 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 GPN1Q9HCN4 374 aaPredicted RBP12.95□□□□□ -0.34
NPM1-201ENST00000296930 RNF150Q9ULK6 438 aa12.95□□□□□ -0.34
NPM1-201ENST00000296930 A0A1W2PPE3 182 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 CREBL2O60519 120 aaPredicted RBP12.94□□□□□ -0.34
NPM1-201ENST00000296930 GAPDHP04406 335 aaKnown RBP12.94□□□□□ -0.34
NPM1-201ENST00000296930 VAMP1P23763 118 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 RND3P61587 244 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 HNF4GQ14541 408 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 C10orf99Q6UWK7 81 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 ZNF645Q8N7E2 425 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 C8orf31Q8N9H6 132 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
NPM1-201ENST00000296930 RTN4IP1Q8WWV3 396 aaPredicted RBP12.94□□□□□ -0.34
NPM1-201ENST00000296930 ABHD14BQ96IU4 210 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 GPHA2Q96T91 129 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 ABHD14AQ9BUJ0 271 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 IGKV1D-33P01593 117 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 IGKV1-33P01594 117 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 Q3ZCU0 254 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 SLC25A48Q6ZT89 311 aaKnown RBP12.94□□□□□ -0.34
NPM1-201ENST00000296930 LINC00311Q8N616 119 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 MRAPQ8TCY5 172 aa12.94□□□□□ -0.34
NPM1-201ENST00000296930 IGHV1-3A0A0C4DH29 117 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 IGLL1P15814 213 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 EBI3Q14213 229 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 MOB3BQ86TA1 216 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 SGPP2Q8IWX5 399 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 CMTM1Q8IZ96 169 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 NAA60Q9H7X0 242 aa12.93□□□□□ -0.34
NPM1-201ENST00000296930 MPPED1O15442 326 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 TNFSF12O43508 249 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 PROP1O75360 226 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 PGLYRP1O75594 196 aaPredicted RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 SFT2D2O95562 160 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 DUS4LO95620 317 aaKnown RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 IL3RAP26951 378 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 EIF4EBP1Q13541 118 aaPredicted RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 MSMO1Q15800 293 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 ODF3L1Q8IXM7 274 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 CHAC2Q8WUX2 184 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 GALNT14Q96FL9 552 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 SDHAF2Q9NX18 166 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 SLC22A5O76082 557 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 REG1BP48304 166 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 ZNF329Q86UD4 541 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 ZBTB34Q8NCN2 500 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 CASTOR1Q8WTX7 329 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 MITD1Q8WV92 249 aa12.92□□□□□ -0.34
NPM1-201ENST00000296930 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
NPM1-201ENST00000296930 SSNA1O43805 119 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 IGHG2P01859 326 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 OR5AC1P0C628 307 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 GPR12P47775 334 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 SLC35E3Q7Z769 313 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 OR2T10Q8NGZ9 312 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 EAF1Q96JC9 268 aaPredicted RBP12.91□□□□□ -0.34
NPM1-201ENST00000296930 NOL4LQ96MY1 436 aaPredicted RBP12.91□□□□□ -0.34
NPM1-201ENST00000296930 TP53RKQ96S44 253 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 PRR13Q9NZ81 148 aa12.91□□□□□ -0.34
NPM1-201ENST00000296930 SAA2-SAA4A0A096LPE2 208 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 IGHV3-72A0A0B4J1Y9 119 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 HMX3A6NHT5 357 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 SAA2P0DJI9 122 aaPredicted RBP12.9□□□□□ -0.34
NPM1-201ENST00000296930 SLC35B1P78383 322 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 FCN2Q15485 313 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 ANKRD55Q3KP44 614 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 SP6Q3SY56 376 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 TGIF2LXQ8IUE1 241 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 FOXRED2Q8IWF2 684 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
NPM1-201ENST00000296930 COMMD1Q8N668 190 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 ZNF251Q9BRH9 671 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 MED28Q9H204 178 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 GAB2Q9UQC2 676 aa12.9□□□□□ -0.34
NPM1-201ENST00000296930 C3orf85A0A1B0GTC6 90 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms