RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 LRRK1Q38SD2 2015 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 DBX1A6NMT0 343 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 HTN1P15515 57 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 AGAP20933 346 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 SUCLG1P53597 346 aaKnown RBP11.44□□□□□ -0.58
HPS3-201ENST00000296051 HIST3H3Q16695 136 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 HEPN1Q6WQI6 88 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 COL25A1Q9BXS0 654 aaPredicted RBP11.44□□□□□ -0.58
HPS3-201ENST00000296051 SRXN1Q9BYN0 137 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 WIPI2Q9Y4P8 454 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 WISP1O95388 367 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 CLDN14O95500 239 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 CBLN1P23435 193 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 ZNF506Q5JVG8 444 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 H0Y980 276 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 GCGP01275 180 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 OR8I2Q8N0Y5 310 aa11.44□□□□□ -0.58
HPS3-201ENST00000296051 M0R2Z0 102 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 TMEM183AQ8IXX5 376 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 OR4X1Q8NH49 305 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 GALNT14Q96FL9 552 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 ZSWIM8A7E2V4 1837 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 BMPR1BO00238 502 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 CD81P60033 236 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 FGF12P61328 243 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 FXYD3Q14802 87 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 MST1LQ2TV78 715 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 SYNGR3O43761 229 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 SRSF10O75494 262 aaKnown RBP11.43□□□□□ -0.58
HPS3-201ENST00000296051 ICAM4Q14773 271 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
HPS3-201ENST00000296051 FOXD3Q9UJU5 478 aaPredicted RBP11.43□□□□□ -0.58
HPS3-201ENST00000296051 EFEMP2O95967 443 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 ZFP36L1Q07352 338 aaKnown RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 KCNMB1Q16558 191 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 ZNF703Q9H7S9 590 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 HELTA6NFD8 242 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 NPIPB7O75200 414 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 UMODP07911 640 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 USF1P22415 310 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 CD1BP29016 333 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 OTX1P32242 354 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 GPX4P36969 197 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 FNDC7Q5VTL7 733 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 MRPL14Q6P1L8 145 aaKnown RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 ZNF788Q6ZQV5 615 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 IGKV1D-13A0A0B4J2D9 117 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 OOEPA6NGQ2 149 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 LDLRAD4O15165 306 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 IGKV1-13P0DP09 117 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 TAS2R60P59551 318 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 HERPUD1Q15011 391 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 LY6EQ16553 131 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 ACSF3Q4G176 576 aaPredicted RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 OR1L1Q8NH94 360 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 A0A0G2JMM0 328 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 A0A1W2PPB8 328 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 KIR3DP1A8MWS1 328 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 GNG7O60262 68 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 ORM2P19652 201 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 UBE2L3P68036 154 aaKnown RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 CTAG1AP78358 180 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 CCDC144NLQ6NUI1 221 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 FAM216AQ8WUB2 273 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 IMMP1LQ96LU5 166 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 NUDT16L1Q9BRJ7 211 aaKnown RBP11.42□□□□□ -0.58
HPS3-201ENST00000296051 RNF122Q9H9V4 155 aa11.42□□□□□ -0.58
HPS3-201ENST00000296051 TRBV6-7A0A0A0MS04 114 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 CD33P20138 364 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 WNT5AP41221 380 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 COTL1Q14019 142 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 NHLRC2Q8NBF2 726 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 OR51G1Q8NGK1 321 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 FLYWCH2Q96CP2 140 aaKnown RBP11.41□□□□□ -0.58
HPS3-201ENST00000296051 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 CHRNA10Q9GZZ6 450 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 SH2D2AQ9NP31 389 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 K7N7A8 449 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 KBTBD11O94819 623 aa11.41□□□□□ -0.58
HPS3-201ENST00000296051 VOPP1Q96AW1 172 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms