RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 H2BFWTQ7Z2G1 175 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 TSKUQ8WUA8 353 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 LRRC61Q9BV99 259 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 OR2D2Q9H210 308 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 DEGS1O15121 323 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 OR1D5P58170 312 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 HIST3H3Q16695 136 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 HEYLQ9NQ87 328 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 SH2D7A6NKC9 451 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 PPIAL4DF5H284 164 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 LINC00205P59089 165 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 YPEL5P62699 121 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 PSG9Q00887 426 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 PSG7Q13046 419 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 TNXAQ16473 311 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 TIGITQ495A1 244 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 Q8N976 141 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 DEFB126Q9BYW3 111 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 SEPSECSQ9HD40 501 aaKnown RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 FSCN3Q9NQT6 498 aa8.58□□□□□ -1.04
CLDN1-201ENST00000295522 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
CLDN1-201ENST00000295522 A0A087X0K7 114 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 IGKV3D-11A0A0A0MRZ8 115 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 IGHV2-26A0A0B4J1V2 119 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 UBE2G1P62253 170 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 HES3Q5TGS1 186 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 RAB37Q96AX2 223 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 SARAFQ96BY9 339 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 C10orf35Q96D05 121 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CLEC1BQ9P126 229 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 AHCTF1Q8WYP5 2266 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 DOCK10Q96BY6 2186 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 OR4C46A6NHA9 309 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 K7EN84 100 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 RAC2P15153 192 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 NPY1RP25929 384 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CRYBB3P26998 211 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 MFAP2P55001 183 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 LGALS4P56470 323 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CLDN15P56746 228 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CEACAM16Q2WEN9 425 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CRISPLD2Q9H0B8 497 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 WDR54Q9H977 334 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CD1BP29016 333 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-201ENST00000295522 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
CLDN1-201ENST00000295522 Q0VG73 95 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 FAM53AQ6NSI3 398 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-201ENST00000295522 WDR73Q6P4I2 378 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 SSX8Q7RTT4 187 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CLUHP3Q96NS8 147 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 GP6Q9HCN6 339 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 FGF21Q9NSA1 209 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-201ENST00000295522 TIMM9Q9Y5J7 89 aa8.57□□□□□ -1.04
CLDN1-201ENST00000295522 PCDH15Q96QU1 1955 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 RHBDD2Q6NTF9 364 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 NCOR1P1Q9H4R4 102 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
CLDN1-201ENST00000295522 SPTY2D1-AS1A0A0U1RR47 76 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 C5orf49A4QMS7 147 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 HELTA6NFD8 242 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 DEFB108AA8MXU0 73 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 CER1O95813 267 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 IGHV3-13P01766 116 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 IGHV3-7P01780 117 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 GATA2P23769 480 aaPredicted RBP8.56□□□□□ -1.04
CLDN1-201ENST00000295522 MRPL49Q13405 166 aaKnown RBP8.56□□□□□ -1.04
CLDN1-201ENST00000295522 TMEM14EPQ6UXP3 125 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 DRAM1Q8N682 238 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 OR8B3Q8NGG8 313 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 OR1N2Q8NGR9 330 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
CLDN1-201ENST00000295522 NABP1Q96AH0 204 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 CDC42EP3Q9UKI2 254 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 TRIOBPQ9H2D6 2365 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 BMPR1BO00238 502 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 OR10J4P0C629 311 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 ZNF585BQ52M93 769 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 SPATA31B1PQ5VZV4 182 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 SLC25A34Q6PIV7 304 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 TRAT1Q6PIZ9 186 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 PCSK4Q6UW60 755 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 Q6ZS52 159 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 C19orf35Q6ZS72 473 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 AAED1Q7RTV5 226 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 FGFBP3Q8TAT2 258 aa8.56□□□□□ -1.04
CLDN1-201ENST00000295522 FRYQ5TBA9 3013 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 PIGBOS1A0A0B4J2F0 54 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 CGAP01215 116 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 CELA3BP08861 270 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms