RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 YPEL1O60688 119 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 YIF1AO95070 293 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 HPRT1P00492 218 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
CCDC116-201ENST00000292779 PSMB3P49720 205 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 RND2P52198 227 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 ZNF134P52741 427 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
CCDC116-201ENST00000292779 LOXL3P58215 753 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 CR1LQ2VPA4 569 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 Q8TCH9 128 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 RAB24Q969Q5 203 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 ABHD17AQ96GS6 310 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 SSX3Q99909 188 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 SMIM7Q9BQ49 75 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
CCDC116-201ENST00000292779 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 CRYAAP02489 173 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 DEFA4P12838 97 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 HOXA5P20719 270 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 NDUFA6P56556 154 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 PRAMEF5Q5TYX0 476 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 VKORC1L1Q8N0U8 176 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 DOK5Q9P104 306 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 TRGC2P03986 189 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 UTF1Q5T230 341 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 RELNP78509 3460 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 KALRNO60229 2985 aa12.47□□□□□ -0.41
CCDC116-201ENST00000292779 F2RL2O00254 374 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 LHBP01229 141 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 SELLP14151 372 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 GLRXP35754 106 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 NKX6-1P78426 367 aaPredicted RBP12.46□□□□□ -0.41
CCDC116-201ENST00000292779 ADIRFQ15847 76 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 AARDQ4LEZ3 155 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
CCDC116-201ENST00000292779 OR4A16Q8NH70 328 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 RPUSD4Q96CM3 377 aaKnown RBP12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 TP53TG5Q9Y2B4 290 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 TANC2Q9HCD6 1990 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.41
CCDC116-201ENST00000292779 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 SLC31A2O15432 143 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 CTAG1AP78358 180 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 TMEM241Q24JQ0 296 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 C1orf185Q5T7R7 199 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 CYP2G1PQ6ZSU1 146 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 ZGRF1Q86YA3 2104 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 Q8N7P7 452 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 LEAP2Q969E1 77 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 CALYQ9NYX4 217 aa12.46□□□□□ -0.42
CCDC116-201ENST00000292779 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 KBTBD11O94819 623 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 FAM87AP0C7U9 286 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 CD1BP29016 333 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 SPCS3P61009 180 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
CCDC116-201ENST00000292779 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 MANBALQ9NQG1 85 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 PLCE1Q9P212 2302 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 RAI1Q7Z5J4 1906 aaPredicted RBP12.45□□□□□ -0.42
CCDC116-201ENST00000292779 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 IFITM10A6NMD0 228 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 IFNA10P01566 189 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
CCDC116-201ENST00000292779 C22orf34Q6ZV56 151 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 S1PR3Q99500 378 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 CTDSP1Q9GZU7 261 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 PARLQ9H300 379 aa12.45□□□□□ -0.42
CCDC116-201ENST00000292779 SPTA1P02549 2419 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 IGLV3-9A0A075B6K5 115 aa12.44□□□□□ -0.42
CCDC116-201ENST00000292779 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC116-201ENST00000292779 PAGE4O60829 102 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms