RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DPRXA6NFQ7 191 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 A6NNC1 897 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 SRSF12Q8WXF0 261 aaKnown RBP13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 SPSB4Q96A44 273 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 GCHFRP30047 84 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 TMEM265A0A087WTH1 108 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 C7orf71A4D174 169 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 C21orf140B9A014 251 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 COX6A1P12074 109 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 BMI1P35226 326 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 GPR6P46095 362 aaPredicted RBP13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 CLDND2Q8NHS1 167 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 MARS2Q96GW9 593 aaKnown RBP13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 CALYQ9NYX4 217 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 TBL2Q9Y4P3 447 aaKnown RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 SPAARA0A1B0GVQ0 90 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 TMEM136Q6ZRR5 245 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 OR5R1Q8NH85 324 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 COL25A1Q9BXS0 654 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 SLC25A17O43808 307 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 FCGR2BP31994 310 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 SLC25A33Q9BSK2 321 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 MOSP00540 346 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 LCTP09848 1927 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 IGLV3-21P80748 117 aaPredicted RBP13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A18PA6NE21 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 UCP3P55916 312 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 GALNT14Q96FL9 552 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 KLK15Q9H2R5 256 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 ZNF430Q9H8G1 570 aaPredicted RBP13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 CGAP01215 116 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 IGKV3-11P04433 115 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 ODAMA1E959 279 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 HS3ST3B1Q9Y662 390 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 F5P12259 2224 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 NPIPB7O75200 414 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 IDI2-AS1Q9NZ38 188 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 TFPI2P48307 235 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM19A2Q8N3H0 131 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 ZNF837Q96EG3 531 aaPredicted RBP13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM117AQ9C073 453 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
SHROOM4-201ENST00000289292 J3QRE1 110 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 CALHM1Q8IU99 346 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 C8orf88P0DMB2 117 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 RNFT1Q5M7Z0 435 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 IGFBP3P17936 291 aaPredicted RBP13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 WDYHV1Q96HA8 205 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 MUC21A0A0G2JKD1 596 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 MUC21A0A140T8X8 626 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 H0YIZ8 118 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 RFPL3SP0C7P2 107 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 LRRC75BQ2VPJ9 315 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 PKIBQ9C010 78 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 GCSAMQ8N6F7 178 aa13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
SHROOM4-201ENST00000289292 A0A1B0GTI1 187 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 ICAM4Q14773 271 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 PCOLCEQ15113 449 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 FAM214BQ7L5A3 538 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 UBE2CO00762 179 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 TM2D1Q9BX74 207 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 AUP1Q9Y679 476 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 IGKV3D-15A0A087WSY6 115 aa13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHROOM4-201ENST00000289292 IGKV3-15P01624 115 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms