RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 COL4A3Q01955 1670 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 FGF12P61328 243 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 CEACAM21Q3KPI0 293 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 OR4A4PQ8NGN8 299 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 SIGLEC12Q96PQ1 595 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 OR8B2Q96RD0 313 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 BDP1A6H8Y1 2624 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 F5H697 171 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 LYZP61626 148 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 SUPT4H1P63272 117 aaKnown RBP10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 Q8IYB0 196 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 DMRTA2Q96SC8 542 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 P2RX4Q99571 388 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 TICRRQ7Z2Z1 1910 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 IGLV3-12A0A075B6K2 115 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 A0A1W2PPE3 182 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 PMS2P1A4D2B8 440 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 E9PLN8 166 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 KBTBD11O94819 623 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 SMIM17P0DL12 118 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 PQLC2Q6ZP29 291 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 MARS2Q96GW9 593 aaKnown RBP10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.69
SLC6A1-201ENST00000287766 J3QT63 122 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 DEFB124Q8NES8 71 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 FAM216AQ8WUB2 273 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 KCNS1Q96KK3 526 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 SGK494Q96LW2 274 aa10.71□□□□□ -0.7
SLC6A1-201ENST00000287766 DNPH1O43598 174 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 SYNGR3O43761 229 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FOLR2P14207 255 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FOXG1P55316 489 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 RIGQ13278 110 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 TEPPQ6URK8 271 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 C17orf82Q86X59 251 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 ZCCHC14Q8WYQ9 949 aaKnown RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 SMIM8Q96KF7 97 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 IMMP1LQ96LU5 166 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 QTRT1Q9BXR0 403 aaKnown RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 AP5S1Q9NUS5 200 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 COL4A4P53420 1690 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 IGSF23A1L1A6 192 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 NPY1RP25929 384 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 H7C2G1 150 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 MOB3BQ86TA1 216 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 MMD2Q8IY49 270 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 CPEB3Q8NE35 698 aaKnown RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 GPR146Q96CH1 333 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 PGLYRP1O75594 196 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FBXW9Q5XUX1 488 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 FADS6Q8N9I5 356 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 SSBP3Q9BWW4 388 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 EGLN1Q9GZT9 426 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 TUBA4BQ9H853 241 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 PXMP4Q9Y6I8 212 aa10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 KIF26AQ9ULI4 1882 aaPredicted RBP10.7□□□□□ -0.7
SLC6A1-201ENST00000287766 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 PROB1E7EW31 1015 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 HIST1H2BLQ99880 126 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 MEGF9Q9H1U4 602 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 DLL3Q9NYJ7 618 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 CISD1Q9NZ45 108 aaKnown RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 TBL2Q9Y4P3 447 aaKnown RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 COL6A6A6NMZ7 2263 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 IGHV3OR15-7A0A075B7D8 119 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 ORM1P02763 201 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 VMA21Q3ZAQ7 101 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 MIC13Q5XKP0 118 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 GALNT14Q96FL9 552 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 RCC1LQ96I51 464 aaKnown RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 hCG_38984A0A1B0GV85 526 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 PLAUP00749 431 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 APELAP0DMC3 54 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 CEACAM1P13688 526 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 JOSD1Q15040 202 aaPredicted RBP10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 CSRP2Q16527 193 aa10.69□□□□□ -0.7
SLC6A1-201ENST00000287766 SLC25A33Q9BSK2 321 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms