RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 UBALD1Q8TB05 177 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 DIRC2Q96SL1 478 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
C9orf3-201ENST00000277198 MAST4O15021 2626 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 UNC79Q9P2D8 2635 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 DNAJC13O75165 2243 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 A0A1B0GWJ7 208 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 OR5H1A6NKK0 313 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 MLNRO43193 412 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 S1PR2O95136 353 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 PFN1P07737 140 aaKnown RBP10.76□□□□□ -0.69
C9orf3-201ENST00000277198 FGF7P21781 194 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 CA7P43166 264 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 AESQ08117 197 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 CDSNQ15517 529 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 BSXQ3C1V8 233 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 ACSM6Q6P461 480 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 OR52L2PQ8NGH6 319 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 FRZBQ92765 325 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 COQ2Q96H96 371 aa10.76□□□□□ -0.69
C9orf3-201ENST00000277198 TRAV20A0A0B4J274 112 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 CCL21O00585 134 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 LYZL6O75951 148 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 MPV17P39210 176 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 GABRA2P47869 451 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 RPP30P78346 268 aaKnown RBP10.75□□□□□ -0.69
C9orf3-201ENST00000277198 ZNF816Q0VGE8 651 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-201ENST00000277198 GTF3C1Q12789 2109 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 WDR82Q6UXN9 313 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 C5orf30Q96GV9 206 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 ZNF835Q9Y2P0 537 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 NAV2Q8IVL1 2488 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 ARHGAP21Q5T5U3 1957 aa10.75□□□□□ -0.69
C9orf3-201ENST00000277198 SPINT2O43291 252 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 SOD3P08294 240 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 HIST1H1BP16401 226 aaKnown RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 ACOT6Q3I5F7 207 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 KRTCAP3Q53RY4 240 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 FFAR4Q5NUL3 377 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 BEND4Q6ZU67 534 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 RAB1CQ92928 201 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 OR5B12Q96R08 314 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 CLN8Q9UBY8 286 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 MPDU1O75352 247 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 GZMHP20718 246 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 CEBPDP49716 269 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 ADORA2A-AS1P86434 159 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 ADIRFQ15847 76 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 MBNL2Q5VZF2 373 aaKnown RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 FAM90A1Q86YD7 464 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 DOLPP1Q86YN1 238 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 ZNF808Q8N4W9 903 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-201ENST00000277198 FAM169BQ8N8A8 192 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 OR51G1Q8NGK1 321 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 MRGPRDQ8TDS7 321 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 BTF3L4Q96K17 158 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 PFDN5Q99471 154 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
C9orf3-201ENST00000277198 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 H7BYZ3 331 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.691e-9■■■■■ 33.1
C9orf3-201ENST00000277198 CD55P08174 381 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 FAM3BP58499 235 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-201ENST00000277198 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-201ENST00000277198 OR2B11Q5JQS5 317 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 COA6Q5JTJ3 125 aaKnown RBP10.73□□□□□ -0.69
C9orf3-201ENST00000277198 FAM209BQ5JX69 171 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-201ENST00000277198 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 GPR61Q9BZJ8 451 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 PARLQ9H300 379 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 SLC25A22Q9H936 323 aa10.73□□□□□ -0.69
C9orf3-201ENST00000277198 C15orf65H3BRN8 121 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 AQP7O14520 342 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 WNT9BO14905 357 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 PDE6DO43924 150 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 TIMM8AO60220 97 aaPredicted RBP10.72□□□□□ -0.69
C9orf3-201ENST00000277198 HPRT1P00492 218 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 GCH1P30793 250 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 SRP14P37108 136 aaKnown RBP10.72□□□□□ -0.69
C9orf3-201ENST00000277198 COL10A1Q03692 680 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 RBPJQ06330 500 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 CR1LQ2VPA4 569 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 ZNF826PQ6ZT77 177 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 C16orf82Q7Z2V1 217 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 NEIL1Q96FI4 390 aaPredicted RBP10.72□□□□□ -0.69
C9orf3-201ENST00000277198 GFOD1Q9NXC2 390 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 JPT1Q9UK76 154 aa10.72□□□□□ -0.69
C9orf3-201ENST00000277198 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms