RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 J3QR06 171 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 HRASP01112 189 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 IGHV2-70P01814 119 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 ADCYAP1P18509 176 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 SP5Q6BEB4 398 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 SPSB3Q6PJ21 355 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 DPPA3Q6W0C5 159 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF841Q6ZN19 808 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF429Q86V71 674 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 C11orf42Q8N5U0 333 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 LINC00311Q8N616 119 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 OR10P1Q8NGE3 313 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 RSG1Q9BU20 258 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 SEC11CQ9BY50 192 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 RAB1BQ9H0U4 201 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 SLC35D1Q9NTN3 355 aa7.84□□□□□ -1.15
TRIM55-201ENST00000276573 RALYQ9UKM9 306 aaKnown RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
TRIM55-201ENST00000276573 HCFC1P51610 2035 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 A0A087X0M5 115 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 TRBV23-1A0A0A0MS06 115 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 A0A1B0GX30 115 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 IL6RP08887 468 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-201ENST00000276573 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 VDAC2P45880 294 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-201ENST00000276573 SERF2P84101 59 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 PEA15Q15121 130 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 GUK1Q16774 197 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 RTL8BQ17RB0 113 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 OR4A47Q6IF82 309 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 C11orf71Q6IPW1 123 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 CENPVQ7Z7K6 275 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-201ENST00000276573 LFNGQ8NES3 379 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 TAF15Q92804 592 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM55-201ENST00000276573 PINX1Q96BK5 328 aaKnown RBP7.83□□□□□ -1.16
TRIM55-201ENST00000276573 HIPK2Q9H2X6 1198 aa7.83□□□□□ -1.16
TRIM55-201ENST00000276573 A0A1B0GW64 132 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 C15orf62A8K5M9 175 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 FAM157AC9JC47 383 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 GPR37O15354 613 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 GNLYP22749 145 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 RPS16P62249 146 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 RPP30P78346 268 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 CCL20P78556 96 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TLE4Q04727 773 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 GUCA2BQ16661 112 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 DHRS7BQ6IAN0 325 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 OR13D1Q8NGV5 346 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SUN5Q8TC36 379 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 ITLN2Q8WWU7 325 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 RBMXL1Q96E39 390 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 CLCC1Q96S66 551 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM147Q9BVK8 224 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 HEYLQ9NQ87 328 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM14BQ9NUH8 114 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TCF19Q9Y242 345 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 FOXA2Q9Y261 457 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SPTA1P02549 2419 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 ATRXP46100 2492 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 BTBD17A6NE02 478 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 C15orf61A6NNL5 157 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SRRM4A7MD48 611 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 UPK2O00526 184 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SCAF4O95104 1147 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 ARG1P05089 322 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SOD3P08294 240 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SFTA3P0C7M3 94 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 IGHV1-8P0DP01 117 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 AGAP20933 346 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 UQCRFS1P47985 274 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 HSPE1P61604 102 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 VWC2Q2TAL6 325 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 AVPI1Q5T686 147 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 PUSL1Q8N0Z8 303 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 SVBPQ8N300 66 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 OR10X1Q8NGY0 326 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 OR9G1Q8NH87 305 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 NEU4Q8WWR8 484 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 ST6GALNAC6Q969X2 333 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TMEM186Q96B77 213 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 AIFM2Q9BRQ8 373 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 PBDC1Q9BVG4 233 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 MRPL20Q9BYC9 149 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 EIF5A2Q9GZV4 153 aaKnown RBP7.82□□□□□ -1.16
TRIM55-201ENST00000276573 RPRMQ9NS64 109 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
TRIM55-201ENST00000276573 PKDREJQ9NTG1 2253 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 NCOR2Q9Y618 2525 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 ZZEF1O43149 2961 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 UBE2L5PA0A1B0GUS4 154 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 A0A1B0GV50 99 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 IFNA10P01566 189 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 IGKV1-16P04430 117 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 MDKP21741 143 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-201ENST00000276573 FAM71F2Q6NXP2 309 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 ABHD12Q8N2K0 398 aa7.81□□□□□ -1.16
TRIM55-201ENST00000276573 OR5AN1Q8NGI8 311 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms