RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CELA3BP08861 270 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 PMCHP20382 165 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 CD1BP29016 333 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 BRS3P32247 399 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 SSTR5P35346 364 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 TPPP2P59282 170 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
COL8A1-202ENST00000273342 TPTE2P1Q5T6R2 138 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 OR2J1Q9GZK6 312 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 C12orf77C9JDV5 145 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 CLDN14O95500 239 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 CYB561P49447 251 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 SPATA31B1PQ5VZV4 182 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 OR5AU1Q8NGC0 362 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 OR1L6Q8NGR2 347 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 NINJ1Q92982 152 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 WDR54Q9H977 334 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 KCNIP1Q9NZI2 227 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 PSG11Q9UQ72 335 aa10.8□□□□□ -0.68
COL8A1-202ENST00000273342 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 DNPH1O43598 174 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 ACTL6BO94805 426 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 PDLIM3Q53GG5 364 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-202ENST00000273342 ABHD12Q8N2K0 398 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 APH1AQ96BI3 265 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 GALMQ96C23 342 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 MIEN1Q9BRT3 115 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 STRADBQ9C0K7 418 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-202ENST00000273342 SFTPCP11686 197 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 MAGEA5P43359 124 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 FXYD3Q14802 87 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 ALKBH2Q6NS38 261 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 SPEM1Q8N4L4 309 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 R3HDM4Q96D70 268 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 TTC28Q96AY4 2481 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 SIAH2O43255 324 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 FOXH1O75593 365 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 HBZP02008 142 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 LHX2P50458 406 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 C11orf42Q8N5U0 333 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 HEYLQ9NQ87 328 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-202ENST00000273342 FZR1Q9UM11 496 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 YTHDF2Q9Y5A9 579 aaKnown RBP10.79□□□□□ -0.68
COL8A1-202ENST00000273342 MED13Q9UHV7 2174 aa10.79□□□□□ -0.68
COL8A1-202ENST00000273342 CEP192Q8TEP8 1941 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 J3QT63 122 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 PDE6DO43924 150 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 NEURL1O76050 574 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 TIMP3P35625 211 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
COL8A1-202ENST00000273342 PSG7Q13046 419 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 EDDM3AQ14507 147 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 ATP6V1FQ16864 119 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 ZNF645Q8N7E2 425 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 SAP25Q8TEE9 199 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
COL8A1-202ENST00000273342 FBXL7Q9UJT9 491 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 POLEQ07864 2286 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 TRBV6-6A0A0A6YYG2 114 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 OR5B21A6NL26 309 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 RNF212BA8MTL3 300 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 K7EN84 100 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 FCGR3BO75015 233 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 OR9G9P0C7N8 305 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 GFRA1P56159 465 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 TMEM183BQ1AE95 376 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 LINC00696Q6ZRV3 163 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 FAM19A2Q8N3H0 131 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 DUSP23Q9BVJ7 150 aa10.78□□□□□ -0.68
COL8A1-202ENST00000273342 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 TNFSF13O75888 250 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 FOXL1Q12952 345 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 MDP1Q86V88 176 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 LRFN3Q9BTN0 628 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 HINT2Q9BX68 163 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 SEPSECSQ9HD40 501 aaKnown RBP10.77□□□□□ -0.68
COL8A1-202ENST00000273342 FOXJ2Q9P0K8 574 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 MPC1Q9Y5U8 109 aa10.77□□□□□ -0.68
COL8A1-202ENST00000273342 NTF3P20783 257 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 CATR1Q13166 79 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 DOLPP1Q86YN1 238 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 Q8N7P7 452 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 CIB3Q96Q77 187 aaPredicted RBP10.77□□□□□ -0.69
COL8A1-202ENST00000273342 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.69
COL8A1-202ENST00000273342 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
COL8A1-202ENST00000273342 TRAV3A0A0B4J244 114 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 PIGBOS1A0A0B4J2F0 54 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 HAND1O96004 215 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 AMTP48728 403 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 HTD2P86397 168 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 Q6ZR03 302 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms