RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 SUB1P53999 127 aaKnown RBP eCLIP12.28□□□□□ -0.44
CNOT9-201ENST00000273064 KRTDAPP60985 99 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
CNOT9-201ENST00000273064 DYSFO75923 2080 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 MYO15AQ9UKN7 3530 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 PXMP4Q9Y6I8 212 aa12.28□□□□□ -0.44
CNOT9-201ENST00000273064 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 RPS2P15880 293 aaKnown RBP12.27□□□□□ -0.44
CNOT9-201ENST00000273064 RPL11P62913 178 aaKnown RBP12.27□□□□□ -0.44
CNOT9-201ENST00000273064 HABP2Q14520 560 aaPredicted RBP12.27□□□□□ -0.44
CNOT9-201ENST00000273064 KHDC3LQ587J8 217 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 GATAD1Q8WUU5 269 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 C18orf12Q96KH6 178 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 ZNF331Q9NQX6 463 aaPredicted RBP12.27□□□□□ -0.44
CNOT9-201ENST00000273064 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 HILPDAQ9Y5L2 63 aa12.27□□□□□ -0.44
CNOT9-201ENST00000273064 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 IGKV1-6A0A0C4DH72 117 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 CTXND1A0A1B0GTU2 59 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 CCL3L1P16619 93 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 IL3RAP26951 378 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 RPL30P62888 115 aaKnown RBP12.27□□□□□ -0.45
CNOT9-201ENST00000273064 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.45
CNOT9-201ENST00000273064 HIST1H3AP68431 136 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 KCNIP2Q9NS61 270 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 CTRB1P17538 263 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 OR10J1P30954 320 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 C1orf185Q5T7R7 199 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 CTRB2Q6GPI1 263 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 SAXO1Q8IYX7 474 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 OR1B1Q8NGR6 318 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 SLC25A17O43808 307 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 ZNF883P0CG24 379 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 RAB7AP51149 207 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 OR5B3Q8NH48 314 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 SGMS2Q8NHU3 365 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 NAT8Q9UHE5 227 aa12.27□□□□□ -0.45
CNOT9-201ENST00000273064 PTPRSQ13332 1948 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 FCN1O00602 326 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 TAS2R45P59539 299 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 RHOBP62745 196 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 RANP62826 216 aaKnown RBP12.26□□□□□ -0.45
CNOT9-201ENST00000273064 GNB2P62879 340 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 OR51B2Q9Y5P1 312 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 S4R3C0 116 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 FRYLO94915 3013 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 KIR2DL2P43627 348 aaPredicted RBP12.26□□□□□ -0.45
CNOT9-201ENST00000273064 PEAR1Q5VY43 1037 aaPredicted RBP12.26□□□□□ -0.45
CNOT9-201ENST00000273064 WDR82Q6UXN9 313 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 GINS3Q9BRX5 216 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 RAB29O14966 203 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 FGF16O43320 207 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 LINC00596Q86U02 117 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 SLC24A4Q8NFF2 622 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
CNOT9-201ENST00000273064 SH2D2AQ9NP31 389 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
CNOT9-201ENST00000273064 PPIAL4EA0A075B759 164 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 IGKV3D-15A0A087WSY6 115 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 PPIAL4DF5H284 164 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CCL21O00585 134 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 RRHO14718 337 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 PPIAL4FP0DN26 164 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 TIMD4Q96H15 378 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 PPIAL4AQ9Y536 164 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 USP9XQ93008 2570 aaPredicted RBP12.25□□□□□ -0.45
CNOT9-201ENST00000273064 TMEM50AO95807 157 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 MYOD1P15172 320 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CT45A1Q5HYN5 189 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 DBX2Q6ZNG2 339 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CT45A3Q8NHU0 189 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 SIRT7Q9NRC8 400 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 HPRT1P00492 218 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 CD3EP07766 207 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 RAB4AP20338 218 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 GNG4P50150 75 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 LYZP61626 148 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 KIAA1644Q3SXP7 199 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 VMA21Q3ZAQ7 101 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 INSIG2Q9Y5U4 225 aa12.25□□□□□ -0.45
CNOT9-201ENST00000273064 SERF2P84101 59 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 ID3Q02535 119 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 PRR31Q5SQ13 230 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 TMEM42Q69YG0 159 aa12.24□□□□□ -0.45
CNOT9-201ENST00000273064 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
CNOT9-201ENST00000273064 TRAV34A0A0B4J273 112 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms