RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 HKR1P10072 659 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 KBTBD11O94819 623 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 TOX4O94842 621 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 TMEM11P17152 192 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 ORM2P19652 201 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 EFNA4P52798 201 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 FGF8P55075 233 aaPredicted RBP12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 DAZAP1Q96EP5 407 aaKnown RBP12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 CRYBA1P05813 215 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 TCF19Q9Y242 345 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 KPTNQ9Y664 436 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 SAA2-SAA4A0A096LPE2 208 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 PCP4L1A6NKN8 68 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 CD8AP01732 235 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 SAA2P0DJI9 122 aaPredicted RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 MMP9P14780 707 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 WSB1Q9Y6I7 421 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 GUK1Q16774 197 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 MRPL20Q9BYC9 149 aaKnown RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 ZNF727A8MUV8 499 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 FAM90A26D6RGX4 464 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 LYRM2Q9NU23 88 aaPredicted RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 NUP210LQ5VU65 1888 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 MGST1P10620 155 aaKnown RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 PJVKQ0ZLH3 352 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 AANATQ16613 207 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 CXorf58Q96LI9 332 aa12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
PDLIM2-201ENST00000265810 TAGLN2P37802 199 aaKnown RBP12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 LYPD2Q6UXB3 125 aa12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 GAFA1Q96PS6 74 aa12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 QTRT1Q9BXR0 403 aaKnown RBP12.02□□□□□ -0.48
PDLIM2-201ENST00000265810 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 TRIM77I1YAP6 450 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 CD1BP29016 333 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF273Q14593 569 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 AQP10Q96PS8 301 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 CABLES2Q9BTV7 478 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 TMEM133Q9H2Q1 129 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 RNASEK-C17orf49H0YIS7 233 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 GNG7O60262 68 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 PITX3O75364 302 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 PRB1P04280 392 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 TMEM200BQ69YZ2 307 aa12.02□□□□□ -0.49
PDLIM2-201ENST00000265810 S100A2P29034 98 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 PARP11Q9NR21 331 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 MED12LQ86YW9 2145 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 RAMP3O60896 148 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 CFDP00746 253 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 TEPPQ6URK8 271 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 MMP26Q9NRE1 261 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 SHANK1Q9Y566 2161 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 LYZP61626 148 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 RHOBP62745 196 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 RSG1Q9BU20 258 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 TMEM56-RWDD3S4R434 201 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 MSGN1A6NI15 193 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 NPBWR1P48145 328 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 PPOXP50336 477 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 LY6EQ16553 131 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 FRZBQ92765 325 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 PATZ1Q9HBE1 687 aaKnown RBP12.01□□□□□ -0.49
PDLIM2-201ENST00000265810 SEC11BP0C7V7 166 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 B2MP61769 119 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 WDR25Q64LD2 544 aaPredicted RBP12□□□□□ -0.49
PDLIM2-201ENST00000265810 BPIFCQ8NFQ6 507 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 MDFIC2A0A1B0GVS7 189 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 RGS13O14921 159 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 SMAD7O15105 426 aaKnown RBP12□□□□□ -0.49
PDLIM2-201ENST00000265810 TGFAP01135 160 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 HLA-GP17693 338 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 UBE2G1P62253 170 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 SUPT4H1P63272 117 aaKnown RBP12□□□□□ -0.49
PDLIM2-201ENST00000265810 OSR1Q8TAX0 266 aaPredicted RBP12□□□□□ -0.49
PDLIM2-201ENST00000265810 MALSU1Q96EH3 234 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 SMIM7Q9BQ49 75 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF835Q9Y2P0 537 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 REG1AP05451 166 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 FAM78BQ5VT40 261 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 OR4A47Q6IF82 309 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 OR1B1Q8NGR6 318 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 OR4C12Q96R67 309 aa12□□□□□ -0.49
PDLIM2-201ENST00000265810 TRBV6-6A0A0A6YYG2 114 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 PCSK4Q6UW60 755 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 SSC4DQ8WTU2 575 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms