RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TEX13DA0A0J9YY54 714 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-201ENST00000265304 C3orf85A0A1B0GTC6 90 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 CRYZL1O95825 349 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 DEFA1P59665 94 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 DEFA3P59666 94 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
SSBP1-201ENST00000265304 RELBQ01201 579 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 CBX3Q13185 183 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 HNF4GQ14541 408 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 PUSL1Q8N0Z8 303 aaKnown RBP11.33□□□□□ -0.6
SSBP1-201ENST00000265304 OR51H1Q8NH63 302 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
SSBP1-201ENST00000265304 HRASP01112 189 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 IGKV1-39P01597 117 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 IGHG2P01859 326 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 IGKV1D-39P04432 117 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 P0C879 139 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 HKR1P10072 659 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 NQO2P16083 231 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 CNTFRP26992 372 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 BLCAPP62952 87 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 DCTN2Q13561 401 aaKnown RBP11.32□□□□□ -0.6
SSBP1-201ENST00000265304 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 SGPP2Q8IWX5 399 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
SSBP1-201ENST00000265304 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 RHOVQ96L33 236 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 MARVELD1Q9BSK0 173 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 BET1LQ9NYM9 111 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 KCNIP3Q9Y2W7 256 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
SSBP1-201ENST00000265304 FAM240BA0A1B0GVZ2 78 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 SHOXO15266 292 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 LPAR6P43657 344 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 TMEM187Q14656 261 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 MMDQ15546 238 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 Q6ZSV7 163 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 PRSS22Q9GZN4 317 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 ZNF702PQ9H963 129 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 NUBP2Q9Y5Y2 271 aa11.31□□□□□ -0.6
SSBP1-201ENST00000265304 PIGBOS1A0A0B4J2F0 54 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 S1PR2O95136 353 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 PTTG1O95997 202 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-201ENST00000265304 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-201ENST00000265304 LIN54Q6MZP7 749 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 ZNF562Q6V9R5 426 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 OR4A5Q8NH83 315 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 C20orf85Q9H1P6 137 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 KIAA1456Q9P272 454 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 FLVCR2Q9UPI3 526 aa11.3□□□□□ -0.6
SSBP1-201ENST00000265304 A0A1B0GUS0 222 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
SSBP1-201ENST00000265304 SLC25A17O43808 307 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 OR2A4O95047 310 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 SFT2D2O95562 160 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 IGF1P05019 195 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 IL5P05113 134 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 SERPINE2P07093 398 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 OR5AC1P0C628 307 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-201ENST00000265304 AKR1C4P17516 323 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 COMPP49747 757 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-201ENST00000265304 PRSS8Q16651 343 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 KRTAP24-1Q3LI83 254 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 OR2B11Q5JQS5 317 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 Q6ZS46 218 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 LHFPL5Q8TAF8 219 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-201ENST00000265304 R3HDM4Q96D70 268 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 OR2A7Q96R45 310 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 TNFRSF19Q9NS68 423 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 SERTAD4Q9NUC0 356 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
SSBP1-201ENST00000265304 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
SSBP1-201ENST00000265304 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 A0A0B4J2A0 478 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 FCN1O00602 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms