RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 FGF12P61328 243 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 RPS19BP1Q86WX3 136 aaKnown RBP13.77□□□□□ -0.21
GPC1-201ENST00000264039 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 AKIRIN1Q9H9L7 192 aaPredicted RBP13.77□□□□□ -0.21
GPC1-201ENST00000264039 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 RRHO14718 337 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 GPX1P07203 203 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
GPC1-201ENST00000264039 SLC23A3Q6PIS1 610 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 IL36BQ9NZH7 164 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 IL19Q9UHD0 177 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 COX11Q9Y6N1 276 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 RHBDL1O75783 438 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 PPOXP50336 477 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 SSR4P51571 173 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 SELENOTP62341 195 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
GPC1-201ENST00000264039 WDR73Q6P4I2 378 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 WFDC8Q8IUA0 241 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 FAM122AQ96E09 287 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 IGKV1-6A0A0C4DH72 117 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 CGAP01215 116 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 IGLC2P0DOY2 106 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 IGLC3P0DOY3 106 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 CENPWQ5EE01 88 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 CHRDL1Q9BU40 450 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
GPC1-201ENST00000264039 AESQ08117 197 aa13.76□□□□□ -0.21
GPC1-201ENST00000264039 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
GPC1-201ENST00000264039 ZNF891A8MT65 544 aaPredicted RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 ZNF324O75467 553 aaPredicted RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 BPIFB3P59826 476 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 PLGLB1Q02325 96 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 OBP2AQ9NY56 170 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 CA7P43166 264 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 RSPO1Q2MKA7 263 aaPredicted RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 IBA57Q5T440 356 aaKnown RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 GTF2H5Q6ZYL4 71 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 NUDT10Q8NFP7 164 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 RCHY1Q96PM5 261 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 DECR2Q9NUI1 292 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 ABI3Q9P2A4 366 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 SPTA1P02549 2419 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 LILRA5A6NI73 299 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 PPIAL4DF5H284 164 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 NEURL1O76050 574 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 CXorf1O96002 111 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 NPPCP23582 126 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 GNG3P63215 75 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 MRPS21P82921 87 aaKnown RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 TMEM240Q5SV17 173 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 TMEM251Q8N6I4 163 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 DAZAP1Q96EP5 407 aaKnown RBP13.75□□□□□ -0.21
GPC1-201ENST00000264039 PYGO2Q9BRQ0 406 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 KCNIP2Q9NS61 270 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
GPC1-201ENST00000264039 TFF1P04155 84 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 GPR12P47775 334 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 OR10D3Q8NH80 312 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 ARFGEF3Q5TH69 2177 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 GATA2P23769 480 aaPredicted RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 RHOBP62745 196 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 RPL8P62917 257 aaKnown RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 NPIPB13A6NJU9 1138 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 NPIPB4C9JG80 1138 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 FBXW9Q5XUX1 488 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 TEX43Q6ZNM6 134 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 FNDC4Q9H6D8 234 aaPredicted RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 WDR54Q9H977 334 aa13.74□□□□□ -0.21
GPC1-201ENST00000264039 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
GPC1-201ENST00000264039 TNCP24821 2201 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 ITGB1BP1O14713 200 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 GOSR1O95249 250 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 CLDN14O95500 239 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 HYAL1Q12794 435 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 ORAOV1Q8WV07 137 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 CLEC7AQ9BXN2 247 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
GPC1-201ENST00000264039 TCFL5Q9UL49 500 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 TIAF1O95411 115 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 FOXL1Q12952 345 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 KCNS1Q96KK3 526 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 FAM173AQ9BQD7 235 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 SRXN1Q9BYN0 137 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 CST9LQ9H4G1 147 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 hCG_38984A0A1B0GV85 526 aa13.73□□□□□ -0.21
GPC1-201ENST00000264039 hDV102S1A0JD36 115 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms