RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 BTNL8Q6UX41 500 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
CTCF-201ENST00000264010 MT-CO2P00403 227 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 HBZP02008 142 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 ERVFC1-1P60608 527 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
CTCF-201ENST00000264010 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 OR10P1Q8NGE3 313 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 DMDP11532 3685 aa13.76□□□□□ -0.21
CTCF-201ENST00000264010 DEFB108AA8MXU0 73 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 DIRC3C9JPN6 131 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 CD81P60033 236 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 SLC35B1P78383 322 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 COL10A1Q03692 680 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 SRSF6Q13247 344 aaKnown RBP13.75□□□□□ -0.21
CTCF-201ENST00000264010 ZNF497Q6ZNH5 498 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 NUDT11Q96G61 164 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 CEACAM1P13688 526 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 TCL1AP56279 114 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 SLC25A22Q9H936 323 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 GCGP01275 180 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 PRRX1P54821 245 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
CTCF-201ENST00000264010 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 OR52L2PQ8NGH6 319 aa13.75□□□□□ -0.21
CTCF-201ENST00000264010 B4DEV8 164 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 WNT9BO14905 357 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 GZMHP20718 246 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 PRDX2P32119 198 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 KIR2DL2P43627 348 aaPredicted RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 SLC38A11Q08AI6 406 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 SLC35E4Q6ICL7 350 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 MAP1LC3B2A6NCE7 125 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 Q56UQ5 140 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 DRAM1Q8N682 238 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 C2orf88Q9BSF0 95 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 MAP1LC3BQ9GZQ8 125 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 FGF23Q9GZV9 251 aaPredicted RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 WFDC1Q9HC57 220 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 HEYLQ9NQ87 328 aaPredicted RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 TECRQ9NZ01 308 aaKnown RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 WIPI2Q9Y4P8 454 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 ZNF645Q8N7E2 425 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 PINX1Q96BK5 328 aaKnown RBP13.74□□□□□ -0.21
CTCF-201ENST00000264010 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
CTCF-201ENST00000264010 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ADH4P08319 380 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ID3Q02535 119 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 IZUMO4Q1ZYL8 232 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 PLPPR2Q96GM1 343 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ZNF835Q9Y2P0 537 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 SLC25A6P12236 298 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 AGAP20933 346 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
CTCF-201ENST00000264010 Q6P435 159 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 PIP4P1Q86T03 277 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 TPRX1Q8N7U7 411 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 M0R1X1 148 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ZNF253O75346 499 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ZNF146Q15072 292 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 MMDQ15546 238 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ACP7Q6ZNF0 438 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 ZNF665Q9H7R5 613 aa13.73□□□□□ -0.21
CTCF-201ENST00000264010 UBE2L5PA0A1B0GUS4 154 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 CXCL1P09341 107 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 OR4A8P0C604 315 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 UQCRFS1P47985 274 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 MOGAT3Q86VF5 341 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 FGFRL1Q8N441 504 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 S1PR3Q99500 378 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 IGHV2OR16-5A0A0B4J2B6 119 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 IGKV1-6A0A0C4DH72 117 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 BPIFB3P59826 476 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 RBPJQ06330 500 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 SPATA45Q537H7 98 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
CTCF-201ENST00000264010 SNHG12Q9BXW3 62 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 LRRC30A6NM36 301 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 C12orf77C9JDV5 145 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 SCGB2A1O75556 95 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 CLEC2AQ6UVW9 174 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 C20orf204Q6ZNR8 217 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 WFDC8Q8IUA0 241 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 TUBA4BQ9H853 241 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 SLC35D1Q9NTN3 355 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
CTCF-201ENST00000264010 C3orf80F5H4A9 247 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 IFNL4K9M1U5 179 aa13.71□□□□□ -0.21
CTCF-201ENST00000264010 GNG7O60262 68 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms