RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 DNAJC4Q9NNZ3 241 aa15.08■□□□□ 0
NOTCH3-201ENST00000263388 ZNF385AQ96PM9 386 aaKnown RBP15.07■□□□□ 0
NOTCH3-201ENST00000263388 NDUFA2O43678 99 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 GHRHP01286 108 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 IGKV1D-16P01601 117 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 ZNF660Q6AZW8 331 aaPredicted RBP15.07■□□□□ 0
NOTCH3-201ENST00000263388 PSG4Q00888 419 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 TMEM177Q53S58 311 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 TMEM171Q8WVE6 324 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 C1QTNF9BB2RNN3 333 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 HLA-DQB1P01920 261 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 SCTP09683 121 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 ERGP11308 486 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 MPV17P39210 176 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 PTGDSP41222 190 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 TNFRSF9Q07011 255 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 TMEM30BQ3MIR4 351 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 FSCN3Q9NQT6 498 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 SF3B6Q9Y3B4 125 aaKnown RBP15.07■□□□□ 0
NOTCH3-201ENST00000263388 A0A1B0GV90 55 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 AHRRA9YTQ3 701 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 GUCA2BQ16661 112 aa15.07■□□□□ 0
NOTCH3-201ENST00000263388 ZNF430Q9H8G1 570 aaPredicted RBP15.07■□□□□ 0
NOTCH3-201ENST00000263388 MARCH11A6NNE9 402 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 C17orf51A8MQB3 221 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 OR2H2O95918 312 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 IGHV4-34P06331 123 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 RUNX1Q01196 453 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 MMD2Q8IY49 270 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 PRSS27Q9BQR3 290 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 C1orf185Q5T7R7 199 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 SPINK2P20155 84 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 C2orf83Q53S99 150 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 PGPEP1Q9NXJ5 209 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 TRAV30A0A087WSZ9 112 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 IGHV3-21A0A0B4J1V1 117 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 CCL21O00585 134 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 UPK3AO75631 287 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 A0A0B4J293 547 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 SPSB4Q96A44 273 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 PLCE1Q9P212 2302 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 LIPFP07098 398 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 SMOC1Q9H4F8 434 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 MEIG1Q5JSS6 88 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 WFDC3Q8IUB2 231 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 ZPLD1Q8TCW7 415 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 DTX4Q9Y2E6 619 aa15.06■□□□□ 0
NOTCH3-201ENST00000263388 PRR33A8MZF0 331 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 FOXS1O43638 330 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 OR2A4O95047 310 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 OR2A7Q96R45 310 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 TSPAN2O60636 221 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 ADRA2AP08913 450 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 TMEM252Q8N6L7 170 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 NRTNQ99748 197 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 HKR1P10072 659 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 SFRP2Q96HF1 295 aa15.05■□□□□ 0
NOTCH3-201ENST00000263388 IGHV1-45A0A0A0MS14 117 aa15.05■□□□□ -0
NOTCH3-201ENST00000263388 PGLYRP4Q96LB8 373 aa15.05■□□□□ -0
NOTCH3-201ENST00000263388 RELQ04864 619 aaPredicted RBP15.05■□□□□ -0
NOTCH3-201ENST00000263388 FAM214BQ7L5A3 538 aa15.05■□□□□ -0
NOTCH3-201ENST00000263388 RHOVQ96L33 236 aa15.05■□□□□ -0
NOTCH3-201ENST00000263388 METTL1Q9UBP6 276 aaKnown RBP15.05■□□□□ -0
NOTCH3-201ENST00000263388 HOXB1P14653 301 aaPredicted RBP15.04■□□□□ -0
NOTCH3-201ENST00000263388 MEF2CQ06413 473 aaPredicted RBP15.04■□□□□ -0
NOTCH3-201ENST00000263388 FGFRL1Q8N441 504 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 A0A1W2PQM1 296 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 NEUROG1Q92886 237 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 RARRES2Q99969 163 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 TRBV23-1A0A0A0MS06 115 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 DANCRP0C864 163 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 RIPPLY2Q5TAB7 128 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 OR51G1Q8NGK1 321 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 TRGC1P0CF51 173 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 UCNP55089 124 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 PKIBQ9C010 78 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 DMRT1Q9Y5R6 373 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 F11RQ9Y624 299 aaKnown RBP15.04■□□□□ -0
NOTCH3-201ENST00000263388 IGKV1-8A0A0C4DH67 115 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 GLIPR1P48060 266 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 CACNG7P62955 275 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 TCF23Q7RTU1 214 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 RFLNBQ8N5W9 214 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 TRAV39A0A0B4J263 110 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 CCL8P80075 99 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 OR10S1Q8NGN2 331 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 GPR132Q9UNW8 380 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 HILPDAQ9Y5L2 63 aa15.04■□□□□ -0
NOTCH3-201ENST00000263388 KLK2P20151 261 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 GCSAMLQ5JQS6 135 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 OR8G5Q8NG78 346 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 MS4A3Q96HJ5 214 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 MRPL32Q9BYC8 188 aaKnown RBP15.03■□□□□ -0
NOTCH3-201ENST00000263388 ZNF658BQ4V348 819 aaPredicted RBP15.03■□□□□ -0
NOTCH3-201ENST00000263388 DDB2Q92466 427 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 KCNK17Q96T54 332 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 C5orf66Q9H5L9 145 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 TGIF2-C20orf24A0A0A6YYL0 155 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 MFAP4P55083 255 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 ATP5IP56385 69 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms