RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 SCO2A0A1W2PP80 73 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 F2Z2F3 143 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 SLC17A3O00476 420 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 FAM201AQ5SY85 155 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 NINJ1Q92982 152 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 SLC31A2O15432 143 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 IFNA10P01566 189 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 ACP1P24666 158 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 HLA-DRB5Q30154 266 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 CYB5R2Q6BCY4 276 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 VWA1Q6PCB0 445 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 CENPVQ7Z7K6 275 aaPredicted RBP13.74□□□□□ -0.21
ZNF541-201ENST00000263351 OR5R1Q8NH85 324 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 FOXH1O75593 365 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 ZNF134P52741 427 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 UBE2NP61088 152 aaKnown RBP13.74□□□□□ -0.21
ZNF541-201ENST00000263351 MSMO1Q15800 293 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
ZNF541-201ENST00000263351 LNP1A1A4G5 178 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 DVL1O14640 695 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 WNT2P09544 360 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 DDA1Q9BW61 102 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 TIMM9Q9Y5J7 89 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 YLPM1P49750 1951 aaKnown RBP13.73□□□□□ -0.21
ZNF541-201ENST00000263351 SPINK4O60575 86 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 CLDN14O95500 239 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 ACP7Q6ZNF0 438 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 MS4A5Q9H3V2 200 aa13.73□□□□□ -0.21
ZNF541-201ENST00000263351 TRGV5A0A0B4J1U4 118 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 GGCTO75223 188 aaKnown RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 SCGB1D1O95968 90 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 CBLN1P23435 193 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 CD1BP29016 333 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 MSMPQ1L6U9 139 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 DUX4L9Q6RFH8 374 aaPredicted RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 MOB3BQ86TA1 216 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 MDS2Q8NDY4 140 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 ZNRD1Q9P1U0 126 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 ADMP35318 185 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 PAX5Q02548 391 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 PEAR1Q5VY43 1037 aaPredicted RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 ZNRF1Q8ND25 227 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 MGST2Q99735 147 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 PARD6GQ9BYG4 376 aaPredicted RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 YTHDF2Q9Y5A9 579 aaKnown RBP13.72□□□□□ -0.21
ZNF541-201ENST00000263351 TRAPPC1Q9Y5R8 145 aa13.72□□□□□ -0.21
ZNF541-201ENST00000263351 SVEP1Q4LDE5 3571 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 RELNP78509 3460 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 OOEPA6NGQ2 149 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 PAX1P15863 534 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 G0S2P27469 103 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
ZNF541-201ENST00000263351 CATR1Q13166 79 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 ACSF3Q4G176 576 aaPredicted RBP13.71□□□□□ -0.21
ZNF541-201ENST00000263351 TREML4Q6UXN2 200 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 HES4Q9HCC6 221 aa13.71□□□□□ -0.21
ZNF541-201ENST00000263351 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
ZNF541-201ENST00000263351 CACNA1HO95180 2353 aa13.71□□□□□ -0.22
ZNF541-201ENST00000263351 DSCAMO60469 2012 aa13.71□□□□□ -0.22
ZNF541-201ENST00000263351 NANOS1Q8WY41 292 aaKnown RBP13.71□□□□□ -0.22
ZNF541-201ENST00000263351 MANBALQ9NQG1 85 aa13.71□□□□□ -0.22
ZNF541-201ENST00000263351 PLXNB1O43157 2135 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 IQCF6A8MYZ5 107 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 M0R1X1 148 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 TIMM8AO60220 97 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-201ENST00000263351 SLC35B1P78383 322 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 OR5I1Q13606 314 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 TGIF2LYQ8IUE0 185 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 Q8IYB0 196 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
ZNF541-201ENST00000263351 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 ACTL6BO94805 426 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 TAS2R60P59551 318 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 SNHG12Q9BXW3 62 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-201ENST00000263351 GNG12Q9UBI6 72 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 WDR83OSQ9Y284 106 aa13.7□□□□□ -0.22
ZNF541-201ENST00000263351 POLR3KQ9Y2Y1 108 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-201ENST00000263351 PKDREJQ9NTG1 2253 aa13.69□□□□□ -0.22
ZNF541-201ENST00000263351 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms