RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 Q6ZR03 302 aa18.87■□□□□ 0.61
MCF2L-201ENST00000261963 C5orf30Q96GV9 206 aa18.87■□□□□ 0.61
MCF2L-201ENST00000261963 WDR61Q9GZS3 305 aaKnown RBP18.87■□□□□ 0.61
MCF2L-201ENST00000261963 TRAV17A0A0B4J275 112 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 TNFSF13O75888 250 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 CECR9P0C854 216 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 PRAMEF6Q5VXH4 476 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 CST9LP1Q5W188 147 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 HAPLN4Q86UW8 402 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 C1orf162Q8NEQ5 155 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-201ENST00000261963 OR4F5Q8NH21 305 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 OR4F4Q96R69 305 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 FZR1Q9UM11 496 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 HOXC12P31275 282 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 RPL15P61313 204 aaKnown RBP18.86■□□□□ 0.61
MCF2L-201ENST00000261963 AESQ08117 197 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 TOMM20LQ6UXN7 152 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 CXXC4Q9H2H0 198 aa18.86■□□□□ 0.61
MCF2L-201ENST00000261963 PRR33A8MZF0 331 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 NUPR1O60356 82 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 IL3RAP26951 378 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 ACP7Q6ZNF0 438 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 RPP25LQ8N5L8 163 aaKnown RBP18.85■□□□□ 0.61
MCF2L-201ENST00000261963 COQ2Q96H96 371 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 KCNIP1Q9NZI2 227 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-201ENST00000261963 VENTXO95231 258 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 FAM78BQ5VT40 261 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 WDR82Q6UXN9 313 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 FGFRL1Q8N441 504 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 OR52L2PQ8NGH6 319 aa18.85■□□□□ 0.61
MCF2L-201ENST00000261963 CNOT1A5YKK6 2376 aaKnown RBP18.85■□□□□ 0.61
MCF2L-201ENST00000261963 A0A1B0GUS0 222 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 BATFQ16520 125 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 SLC35E4Q6ICL7 350 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 ZNF645Q8N7E2 425 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 SARAFQ96BY9 339 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 BTF3L4Q96K17 158 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 PARD6GQ9BYG4 376 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-201ENST00000261963 TMEM106BQ9NUM4 274 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 PXMP4Q9Y6I8 212 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 A0A0U1RQK1 487 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 ZNF320A2RRD8 509 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 IL6RP08887 468 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-201ENST00000261963 KITLGP21583 273 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 GCH1P30793 250 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 RANP62826 216 aaKnown RBP18.84■□□□□ 0.61
MCF2L-201ENST00000261963 EIF4EBP1Q13541 118 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-201ENST00000261963 LRP11Q86VZ4 500 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 GALMQ96C23 342 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 OR4C12Q96R67 309 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 MSL2Q9HCI7 577 aa18.84■□□□□ 0.61
MCF2L-201ENST00000261963 CACNA1DQ01668 2161 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 TIMM8AO60220 97 aaPredicted RBP18.83■□□□□ 0.61
MCF2L-201ENST00000261963 RAMP3O60896 148 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 HBZP02008 142 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 CHRNA7P36544 502 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 FABP6P51161 128 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 RPL30P62888 115 aaKnown RBP18.83■□□□□ 0.61
MCF2L-201ENST00000261963 OR5I1Q13606 314 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 TAF15Q92804 592 aaKnown RBP eCLIP18.83■□□□□ 0.61
MCF2L-201ENST00000261963 OR2D2Q9H210 308 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 MANBALQ9NQG1 85 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 PLSCR4Q9NRQ2 329 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 METRNQ9UJH8 293 aa18.83■□□□□ 0.61
MCF2L-201ENST00000261963 IGKV1D-33P01593 117 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 IGKV1-33P01594 117 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 IGLV1-44P01699 117 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 TEX43Q6ZNM6 134 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 OR5T1Q8NG75 326 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 CMTM2Q8TAZ6 248 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 USF3Q68DE3 2245 aa18.83■□□□□ 0.6
MCF2L-201ENST00000261963 RNF212BA8MTL3 300 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 HMGB3O15347 200 aaKnown RBP18.82■□□□□ 0.6
MCF2L-201ENST00000261963 GALR2O43603 387 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-201ENST00000261963 TMEM183BQ1AE95 376 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 PRR7Q8TB68 274 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 DKK4Q9UBT3 224 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 OOEPA6NGQ2 149 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 YPEL1O60688 119 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 YPEL2Q96QA6 119 aa18.82■□□□□ 0.6
MCF2L-201ENST00000261963 CHD3Q12873 2000 aaKnown RBP18.82■□□□□ 0.6
MCF2L-201ENST00000261963 INTS1Q8N201 2190 aaKnown RBP18.82■□□□□ 0.6
MCF2L-201ENST00000261963 IGHV2OR16-5A0A0B4J2B6 119 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 SIAH2O43255 324 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 GNG10P50151 68 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 TDRG1Q3Y452 100 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 ZBTB34Q8NCN2 500 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 MRGPRDQ8TDS7 321 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 TAAR6Q96RI8 345 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 DMXL1Q9Y485 3027 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 IGHV1-18A0A0C4DH31 117 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 UBE2L5PA0A1B0GUS4 154 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 P0C879 139 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 BRWD1-AS2P59051 145 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 DEFB109BQ30KR1 87 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 COL5A1-AS1Q5SY13 56 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 ZNF808Q8N4W9 903 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-201ENST00000261963 GATAD1Q8WUU5 269 aa18.81■□□□□ 0.6
MCF2L-201ENST00000261963 NEIL1Q96FI4 390 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms