RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PHYHIPLQ96FC7 376 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 TRGV2A0A075B6R0 118 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PSG7Q13046 419 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 RFLNBQ8N5W9 214 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 CBY3A6NI87 242 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 H7C1H1 209 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 Q6ZNX1 250 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 Q96M66 194 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PGPA6NDG6 321 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 NDUFS8O00217 210 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 APCSP02743 223 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 GPR183P32249 361 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 AMELYQ99218 206 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 C21orf62Q9NYP8 219 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PINLYPA6NC86 204 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 ICMTO60725 284 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 ZNF672Q499Z4 452 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 CADM3Q8N126 398 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 CRIPAKQ8N1N5 446 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PARD6AQ9NPB6 346 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
PDGFRB-201ENST00000261799 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 J3QR89 54 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 M0R3E3 92 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 ELOA3CA0A087WX78 387 aaPredicted RBP11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 AP4M1O00189 453 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 XAF1Q6GPH4 301 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 SELENOHQ8IZQ5 122 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 OR51M1Q9H341 326 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 NPBWR2P48146 333 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 CRYBA2P53672 197 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 PRSS8Q16651 343 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 VMO1Q7Z5L0 202 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 OR51G1Q8NGK1 321 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 VGLL1Q99990 258 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 LMX1BO60663 402 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
PDGFRB-201ENST00000261799 PRSS23O95084 383 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 ZP3P21754 424 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 CCKARP32238 428 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 SPNP16150 400 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 RCC1P18754 421 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 TMEM167AQ8TBQ9 72 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 LYNX1G3V0Z9 82 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 RAMP1O60894 148 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 LYNX1P0DP58 116 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 EGR4Q05215 589 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 CD99P14209 185 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 UBE2V2Q15819 145 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 DHRS11Q6UWP2 260 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 VKORC1L1Q8N0U8 176 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 RSG1Q9BU20 258 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 MRPL20Q9BYC9 149 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 CRIM1Q9NZV1 1036 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 HKR1P10072 659 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 PAX1P15863 534 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
PDGFRB-201ENST00000261799 TUBGCP6Q96RT7 1819 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 Q96MF0 132 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 SLIRPQ9GZT3 109 aaKnown RBP11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 IGHV3-35A0A0C4DH35 117 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 E9PQ18 207 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 LEMD1Q68G75 181 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 LRRC75AQ8NAA5 344 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 TNFRSF18Q9Y5U5 241 aa11.46□□□□□ -0.57
PDGFRB-201ENST00000261799 C5orf52A6NGY3 159 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 Q6ZS92 163 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 GPR146Q96CH1 333 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 IGLV3-32A0A0A0MS00 114 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 HMSDA8MTL9 139 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 A8MWL6 223 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms