RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ZNF891A8MT65 544 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-201ENST00000261646 ADMP35318 185 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 PPOXP50336 477 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 SPEM2Q0P670 501 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 RNPS1Q15287 305 aaKnown RBP13.79□□□□□ -0.2
SREBF1-201ENST00000261646 MMDQ15546 238 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 SRXN1Q9BYN0 137 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 IGKV1-12A0A0C4DH73 117 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 ODAMA1E959 279 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 ISLRO14498 428 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 IGKV1D-12P01611 117 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 SP1P08047 785 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 TMEM208Q9BTX3 173 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 DYNLRB1Q9NP97 96 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 TIMM9Q9Y5J7 89 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 HELZP42694 1942 aaKnown RBP13.79□□□□□ -0.2
SREBF1-201ENST00000261646 SCO2A0A1W2PP80 73 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 GAGE10A6NGK3 116 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 EPHA8P29322 1005 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-201ENST00000261646 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 GBGT1Q8N5D6 347 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 NKX6-3A6NJ46 265 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 P01737 135 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 PDPNQ86YL7 162 aa13.79□□□□□ -0.2
SREBF1-201ENST00000261646 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
SREBF1-201ENST00000261646 COL8A1P27658 744 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 FAM90A2PQ658T7 463 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 ZNF645Q8N7E2 425 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 SPSB4Q96A44 273 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 IGHV5-10-1A0A0J9YXX1 117 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 GZMHP20718 246 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 PI4KAP42356 2102 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 CSN1S1P47710 185 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 ZNF826PQ6ZT77 177 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 WIPF3A6NGB9 483 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 SYNGR3O43761 229 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 LTBRP36941 435 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 RPP25LQ8N5L8 163 aaKnown RBP13.78□□□□□ -0.2
SREBF1-201ENST00000261646 ST6GALNAC6Q969X2 333 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 LOXL2Q9Y4K0 774 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
SREBF1-201ENST00000261646 CLDN14O95500 239 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 FAM87AP0C7U9 286 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 CCL11P51671 97 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 TMEM54Q969K7 222 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 FAM131CQ96AQ9 280 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 TWSG1Q9GZX9 223 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 PRDM13Q9H4Q3 707 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 NRN1Q9NPD7 142 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 IL36BQ9NZH7 164 aa13.77□□□□□ -0.2
SREBF1-201ENST00000261646 J3QR06 171 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 EFNA2O43921 213 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 SNHG12Q9BXW3 62 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 TRAV1-1A0A0B4J248 108 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 CENPWQ5EE01 88 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 SLC25A34Q6PIV7 304 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 VKORC1L1Q8N0U8 176 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 SEMA5BQ9P283 1151 aa13.77□□□□□ -0.21
SREBF1-201ENST00000261646 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 GCHFRP30047 84 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 SOX8P57073 446 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 RIPPLY2Q5TAB7 128 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 MAGEA5P43359 124 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 C19orf35Q6ZS72 473 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 MDP1Q86V88 176 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 OR8A1Q8NGG7 326 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 ZNF524Q96C55 264 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 SGK494Q96LW2 274 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 B4E171 279 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 TSPAN7P41732 249 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 PRDM14Q9GZV8 571 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 PCED1AQ9H1Q7 454 aa13.76□□□□□ -0.21
SREBF1-201ENST00000261646 RRHO14718 337 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 RHBDL1O75783 438 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 ADH4P08319 380 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 SAXO1Q8IYX7 474 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 OR1B1Q8NGR6 318 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 MAFAQ8NHW3 353 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-201ENST00000261646 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-201ENST00000261646 CXXC4Q9H2H0 198 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 MYO7BQ6PIF6 2116 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 M0R1B8 84 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 FLYWCH2Q96CP2 140 aaKnown RBP13.75□□□□□ -0.21
SREBF1-201ENST00000261646 TNFSF13O75888 250 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 WISP1O95388 367 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 A6NDN8 102 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 NUDT3O95989 172 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 PLAUP00749 431 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 AMY1AP04745 511 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 KIR2DS2P43631 304 aa13.75□□□□□ -0.21
SREBF1-201ENST00000261646 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-201ENST00000261646 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms