RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 C1orf100Q5SVJ3 147 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 TNFAIP6P98066 277 aaPredicted RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 OR4X2Q8NGF9 303 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 LOXL4Q96JB6 756 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 RTBDNQ9BSG5 229 aaPredicted RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 CEACAM18A8MTB9 384 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 WISP3O95389 354 aaPredicted RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 MGPP08493 103 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 RPS20P60866 119 aaKnown RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 COX5BP10606 129 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 ZNF83P51522 516 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 SDF2L1Q9HCN8 221 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 ROM1Q03395 351 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 PLSCR2Q9NRY7 297 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 SOX8P57073 446 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 TMEM177Q53S58 311 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 ZNF324BQ6AW86 544 aaPredicted RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 SEMA5BQ9P283 1151 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 TCFL5Q9UL49 500 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 TET1Q8NFU7 2136 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 SYNGR1O43759 233 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 NDUFA3O95167 84 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 WFDC6Q9BQY6 131 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 WFDC1Q9HC57 220 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 PGPA6NDG6 321 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 PNKDQ8N490 385 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 NPVFQ9HCQ7 196 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 RBFOX2O43251 390 aaKnown RBP eCLIP6.18□□□□□ -1.423e-6■■■□□ 18
HERC2-201ENST00000261609 CCL20P78556 96 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 PSG6Q00889 435 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 SRSF12Q8WXF0 261 aaKnown RBP6.18□□□□□ -1.42
HERC2-201ENST00000261609 J3KRW8 73 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 K7N7A8 449 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 OR4D5Q8NGN0 318 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 FAM222BQ8WU58 562 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 ZNF236Q9UL36 1845 aa6.18□□□□□ -1.42
HERC2-201ENST00000261609 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 FTH1P19P0C7X4 201 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 UNQ5815/PRO19632Q6UWF5 114 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 IGHV5-51A0A0C4DH38 117 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 NPSP0C0P6 89 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 WDR31Q8NA23 367 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 SLC25A28Q96A46 364 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 GZMBP10144 247 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 ZFP36L2P47974 494 aaKnown RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 OR4C13Q8NGP0 309 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 SGK494Q96LW2 274 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 C17orf51A8MQB3 221 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 CISD3P0C7P0 127 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 BTCP35070 178 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 TDGF1P3P51864 188 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 DMRTA2Q96SC8 542 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 RNF222A6NCQ9 220 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 UPK3AO75631 287 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 TNFSF15O95150 251 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 FAM117AQ9C073 453 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 LRP5O75197 1615 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 SPINK8P0C7L1 97 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 GPBAR1Q8TDU6 330 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 CCL17Q92583 94 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 LRRC75BQ2VPJ9 315 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 A0A1W2PPE3 182 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 SFTPA2Q8IWL1 248 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 SFTPA1Q8IWL2 248 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 ANK1P16157 1881 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 TRAV8-4A0A0B4J246 113 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 IZUMO1RA6ND01 250 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 PTCRAQ6ISU1 281 aaPredicted RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 ZNF645Q8N7E2 425 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 ZDHHC16Q969W1 377 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 CTGFP29279 349 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 DEFB109BQ30KR1 87 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 C16orf47Q6ZP98 133 aaPredicted RBP6.17□□□□□ -1.42
HERC2-201ENST00000261609 CGB1A6NKQ9 187 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 MFRPQ9BY79 579 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
HERC2-201ENST00000261609 A0A1B0GWJ7 208 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 CDIPTO14735 213 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 PRSS12P56730 875 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 TMEM196Q5HYL7 178 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 CLDN14O95500 239 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 TRA2AQ13595 282 aaKnown RBP eCLIP6.16□□□□□ -1.42
HERC2-201ENST00000261609 HRKO00198 91 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 ZNF324O75467 553 aaPredicted RBP6.16□□□□□ -1.42
HERC2-201ENST00000261609 ID1P41134 155 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 MRPL52Q86TS9 123 aaKnown RBP6.16□□□□□ -1.42
HERC2-201ENST00000261609 FREM1Q5H8C1 2179 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 APOHP02749 345 aaPredicted RBP6.16□□□□□ -1.42
HERC2-201ENST00000261609 CEACAM21Q3KPI0 293 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 SRFP11831 508 aa6.16□□□□□ -1.42
HERC2-201ENST00000261609 SSPNQ14714 243 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms