RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 A0A0G2JMM0 328 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 A0A1W2PPB8 328 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 KIR3DP1A8MWS1 328 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 ISG15P05161 165 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 ZNF121P58317 390 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-201ENST00000261556 HES1Q14469 280 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-201ENST00000261556 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 CD226Q15762 336 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 TMEM70Q9BUB7 260 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 CHRNA10Q9GZZ6 450 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
TMEM260-201ENST00000261556 RLFQ13129 1914 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
TMEM260-201ENST00000261556 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 SYNGR2O43760 224 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 VDAC1P21796 283 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 KIR2DS4P43632 304 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-201ENST00000261556 KIR2DS1Q14954 304 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 C1orf100Q5SVJ3 147 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 DGAT2L6Q6ZPD8 337 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 FREM3P0C091 2139 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 MRGPRFQ96AM1 343 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 NAPSAO96009 420 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-201ENST00000261556 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
TMEM260-201ENST00000261556 PSG6Q00889 435 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 GAPTQ8N292 157 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 DNASE2BQ8WZ79 361 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 PTX4Q96A99 478 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 RASL10BQ96S79 203 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 TMEM38BQ9NVV0 291 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 A0A1W2PPV9 198 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 HRKO00198 91 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 LYL1P12980 280 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
TMEM260-201ENST00000261556 TOMM40O96008 361 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 SRSF7Q16629 238 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM260-201ENST00000261556 SPINK14Q6IE38 97 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 TYMSP04818 313 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 IGLL1P15814 213 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 ATP5G3P48201 142 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 PRDM6Q9NQX0 595 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 RER1O15258 196 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 ZNF137PP52743 207 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
TMEM260-201ENST00000261556 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
TMEM260-201ENST00000261556 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 MMP23AO75900 390 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 LINC00869P0C866 280 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 MEOX1P50221 254 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 SERF2P84101 59 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 H3BVH4 76 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
TMEM260-201ENST00000261556 NPBWR2P48146 333 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 OR5A2Q8NGI9 324 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 YPEL4Q96NS1 127 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.1□□□□□ -0.633e-6■■■■□ 24
TMEM260-201ENST00000261556 IGLC7A0M8Q6 106 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 PPYP01298 95 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 FTH1P19P0C7X4 201 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 OR2Z1Q8NG97 314 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 OR10D3Q8NH80 312 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 CT55Q8WUE5 264 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 DAZAP1Q96EP5 407 aaKnown RBP11.1□□□□□ -0.63
TMEM260-201ENST00000261556 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 CCL28Q9NRJ3 127 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 PKDREJQ9NTG1 2253 aa11.1□□□□□ -0.63
TMEM260-201ENST00000261556 OR4A16Q8NH70 328 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 OR1F12Q8NHA8 337 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 KBTBD11-OT1A0A1B0GTJ5 212 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 TSPAN2O60636 221 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 RAMP3O60896 148 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 CELA3AP09093 270 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 PATE4P0C8F1 98 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 VSTM2LQ96N03 204 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 SSBP3Q9BWW4 388 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-201ENST00000261556 DYSFO75923 2080 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms