RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 VWC2Q2TAL6 325 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 RPL39P5Q59GN2 51 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 CT45A1Q5HYN5 189 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 THNSL2Q86YJ6 484 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 FAM216BQ8N7L0 139 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 CT45A3Q8NHU0 189 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 R3HDM4Q96D70 268 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 WDR61Q9GZS3 305 aaKnown RBP14.52□□□□□ -0.09
SSB-201ENST00000260956 SMDT1Q9H4I9 107 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 AKAP9Q99996 3911 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.51□□□□□ -0.09
SSB-201ENST00000260956 TNFRSF13BO14836 293 aaPredicted RBP14.51□□□□□ -0.09
SSB-201ENST00000260956 GPR37O15354 613 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 IFNA5P01569 189 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 HBG1P69891 147 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 HBG2P69892 147 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 SLC38A11Q08AI6 406 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 ZNF726P1Q15940 193 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 SPANXN5Q5MJ07 72 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.51□□□□□ -0.09
SSB-201ENST00000260956 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 ZNF665Q9H7R5 613 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 CCDC168Q8NDH2 2452 aa14.51□□□□□ -0.09
SSB-201ENST00000260956 SHISA9B4DS77 424 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 M0R1X1 148 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 PLAUP00749 431 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 ARG1P05089 322 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 NFYBP25208 207 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 H2BFWTQ7Z2G1 175 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 PLPPR2Q96GM1 343 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 CCL13Q99616 98 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 RPRMQ9NS64 109 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 FBXO7Q9Y3I1 522 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 CELSR1Q9NYQ6 3014 aa14.5□□□□□ -0.09
SSB-201ENST00000260956 ZNF729A6NN14 1252 aaPredicted RBP14.49□□□□□ -0.09
SSB-201ENST00000260956 HPRT1P00492 218 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 GYPAP02724 150 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 ATF4P18848 351 aaPredicted RBP14.49□□□□□ -0.09
SSB-201ENST00000260956 TMEM30BQ3MIR4 351 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 ZNF506Q5JVG8 444 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 AKR1C8PQ5T2L2 129 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 SSX7Q7RTT5 188 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 DTD1Q8TEA8 209 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 MBD3L1Q8WWY6 194 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 RARRES2Q99969 163 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 PBDC1Q9BVG4 233 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 VSIRQ9H7M9 311 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 TIMM9Q9Y5J7 89 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 TET2Q6N021 2002 aaPredicted RBP14.49□□□□□ -0.09
SSB-201ENST00000260956 C15orf62A8K5M9 175 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 MMP23AO75900 390 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 PAX6P26367 422 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 RAB7AP51149 207 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 ICAM4Q14773 271 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 CLDND2Q8NHS1 167 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 TAF15Q92804 592 aaKnown RBP eCLIP14.49□□□□□ -0.09
SSB-201ENST00000260956 SLC35B3Q9H1N7 401 aa14.49□□□□□ -0.09
SSB-201ENST00000260956 SAA2-SAA4A0A096LPE2 208 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 TRGV10A0A0A0MS01 117 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 RBFOX3A6NFN3 312 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 FCGR3BO75015 233 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 SAA2P0DJI9 122 aaPredicted RBP14.48□□□□□ -0.09
SSB-201ENST00000260956 CCL8P80075 99 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 NCMAPQ5T1S8 102 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 ADAM5Q6NVV9 412 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 ETV3LQ6ZN32 361 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 DEFB108BQ8NET1 73 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 LEAP2Q969E1 77 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 QTRT1Q9BXR0 403 aaKnown RBP14.48□□□□□ -0.09
SSB-201ENST00000260956 RAB9BQ9NP90 201 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 IDI2-AS1Q9NZ38 188 aa14.48□□□□□ -0.09
SSB-201ENST00000260956 DOCK11Q5JSL3 2073 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 A0A1B0GV50 99 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 SRP19P09132 144 aaKnown RBP14.47□□□□□ -0.09
SSB-201ENST00000260956 TNFRSF1AP19438 455 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 KIR2DS2P43631 304 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 SERF2P84101 59 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 RELBQ01201 579 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 Q8N7P7 452 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 OR52E5Q8NH55 327 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 CIB3Q96Q77 187 aaPredicted RBP14.47□□□□□ -0.09
SSB-201ENST00000260956 TMEM147Q9BVK8 224 aa14.47□□□□□ -0.09
SSB-201ENST00000260956 EIF5A2Q9GZV4 153 aaKnown RBP14.47□□□□□ -0.09
SSB-201ENST00000260956 RPUSD1Q9UJJ7 312 aaKnown RBP14.47□□□□□ -0.09
SSB-201ENST00000260956 ANKRD17O75179 2603 aaKnown RBP14.47□□□□□ -0.09
SSB-201ENST00000260956 E7EQL1 145 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 TMEM178BH3BS89 294 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 IGHV3-7P01780 117 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 HBE1P02100 147 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 VDAC2P45880 294 aaPredicted RBP14.46□□□□□ -0.09
SSB-201ENST00000260956 POU2AF1Q16633 256 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 ATP6V1FQ16864 119 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
SSB-201ENST00000260956 LILRB2Q8N423 598 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 SCGB1C1Q8TD33 95 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 NEUROG1Q92886 237 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 RBMXL1Q96E39 390 aaKnown RBP14.46□□□□□ -0.09
SSB-201ENST00000260956 RCC1LQ96I51 464 aaKnown RBP14.46□□□□□ -0.09
SSB-201ENST00000260956 AIFM2Q9BRQ8 373 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 TMEM204Q9BSN7 226 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms