RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 C11orf42Q8N5U0 333 aa13.6□□□□□ -0.23
FDX1-201ENST00000260270 PATZ1Q9HBE1 687 aaKnown RBP13.6□□□□□ -0.23
FDX1-201ENST00000260270 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.6□□□□□ -0.23
FDX1-201ENST00000260270 TRAPPC2LQ9UL33 140 aa13.6□□□□□ -0.23
FDX1-201ENST00000260270 TRAV34A0A0B4J273 112 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 GRIFINA4D1Z8 144 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 HSPB6O14558 160 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 CDIPTO14735 213 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 HBZP02008 142 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 ZNF16P17020 682 aaPredicted RBP13.59□□□□□ -0.23
FDX1-201ENST00000260270 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 SLC38A11Q08AI6 406 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 COTL1Q14019 142 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 TMEM30BQ3MIR4 351 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 LPAR2Q9HBW0 351 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 NAGKQ9UJ70 344 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 TANC2Q9HCD6 1990 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 KBTBD11O94819 623 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
FDX1-201ENST00000260270 CD99P14209 185 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 IMMP2LQ96T52 175 aa13.59□□□□□ -0.23
FDX1-201ENST00000260270 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
FDX1-201ENST00000260270 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.58□□□□□ -0.23
FDX1-201ENST00000260270 SIRPB1O00241 398 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 RAMP3O60896 148 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 PROP1O75360 226 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 LOXL3P58215 753 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 CATR1Q13166 79 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 ACSM6Q6P461 480 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.23
FDX1-201ENST00000260270 NEK7Q8TDX7 302 aa13.58□□□□□ -0.23
FDX1-201ENST00000260270 NXPH2O95156 264 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 MRPS11P82912 194 aaKnown RBP13.58□□□□□ -0.24
FDX1-201ENST00000260270 Q6ZVH6 145 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 OR1L1Q8NH94 360 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 KNTC1P50748 2209 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 IGLV3-9A0A075B6K5 115 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 AHRRA9YTQ3 701 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 MPDU1O75352 247 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 RNASEH2CQ8TDP1 164 aaKnown RBP13.58□□□□□ -0.24
FDX1-201ENST00000260270 TXNDC17Q9BRA2 123 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 C12orf49Q9H741 205 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 WDR83OSQ9Y284 106 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 SLC25A15Q9Y619 301 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 ARL2-SNX15V9GYD0 113 aa13.58□□□□□ -0.24
FDX1-201ENST00000260270 IAPPP10997 89 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 VDAC2P45880 294 aaPredicted RBP13.57□□□□□ -0.24
FDX1-201ENST00000260270 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 IGHV2OR16-5A0A0B4J2B6 119 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 NUPR1O60356 82 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 IFNA1P01562 189 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
FDX1-201ENST00000260270 METTL15P1P0C7V9 234 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 EGR1P18146 543 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 SPINK2P20155 84 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 BSXQ3C1V8 233 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 CD177Q8N6Q3 437 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 VN1R17PQ8TDU5 208 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 NPCDR1Q9BY65 106 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 IGHV1-18A0A0C4DH31 117 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 HNF1AP20823 631 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 DUTP33316 252 aaKnown RBP13.56□□□□□ -0.24
FDX1-201ENST00000260270 KIR2DS2P43631 304 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
FDX1-201ENST00000260270 SMIM21Q3B7S5 101 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 PPP1R3CQ9UQK1 317 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 MAP1LC3B2A6NCE7 125 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 LINC00473A8K010 186 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 CECR9P0C854 216 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 UBE2NP61088 152 aaKnown RBP13.56□□□□□ -0.24
FDX1-201ENST00000260270 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
FDX1-201ENST00000260270 DEFB123Q8N688 67 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 MAP1LC3BQ9GZQ8 125 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
FDX1-201ENST00000260270 LSM4Q9Y4Z0 139 aaKnown RBP13.56□□□□□ -0.24
FDX1-201ENST00000260270 C17orf98A8MV24 154 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 S1PR2O95136 353 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 RNASE8Q8TDE3 154 aaKnown RBP13.55□□□□□ -0.24
FDX1-201ENST00000260270 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 ZNF320A2RRD8 509 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 DEFA4P12838 97 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 C1orf194Q5T5A4 169 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 FAM78BQ5VT40 261 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 Q8TCH9 128 aa13.55□□□□□ -0.24
FDX1-201ENST00000260270 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
FDX1-201ENST00000260270 SPATA46Q5T0L3 261 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 TCF23Q7RTU1 214 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 ERASQ7Z444 233 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 ZNF439Q8NDP4 499 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 GATAD1Q8WUU5 269 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
FDX1-201ENST00000260270 PSMB3P49720 205 aa13.54□□□□□ -0.24
FDX1-201ENST00000260270 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms