RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 OSR1Q8TAX0 266 aaPredicted RBP12.53□□□□□ -0.4
GYPC-201ENST00000259254 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
GYPC-201ENST00000259254 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
GYPC-201ENST00000259254 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 FAM25EA8MYX2 175 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 CCSO14618 274 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 ADAP1O75689 374 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 TMEM11P17152 192 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 G6PCP35575 357 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 SCGB2A2Q13296 93 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 HABP2Q14520 560 aaPredicted RBP12.52□□□□□ -0.41
GYPC-201ENST00000259254 VKORC1L1Q8N0U8 176 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.41
GYPC-201ENST00000259254 SSX3Q99909 188 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 MGAT4CQ9UBM8 478 aa12.52□□□□□ -0.41
GYPC-201ENST00000259254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.52□□□□□ -0.41
GYPC-201ENST00000259254 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 DUXBA0A1W2PPF3 345 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 H3BUX3 64 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 RRAS2P62070 204 aaPredicted RBP12.51□□□□□ -0.41
GYPC-201ENST00000259254 FCN2Q15485 313 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 VMA21Q3ZAQ7 101 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
GYPC-201ENST00000259254 MDFIQ99750 246 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 AIFM2Q9BRQ8 373 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 RAB18Q9NP72 206 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
GYPC-201ENST00000259254 CUBNO60494 3623 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 BTBD17A6NE02 478 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 SRD5A1P18405 259 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 VDAC1P21796 283 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 LGALS7P47929 136 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 DYNLT3P51808 116 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 MMDQ15546 238 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 LY6EQ16553 131 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
GYPC-201ENST00000259254 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
GYPC-201ENST00000259254 THNSL2Q86YJ6 484 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 RITA1Q96K30 269 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 RHOVQ96L33 236 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 KIAA1456Q9P272 454 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
GYPC-201ENST00000259254 DNHD1Q96M86 4753 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 DBX1A6NMT0 343 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 NCBP2LA6PVI3 153 aaKnown RBP12.49□□□□□ -0.41
GYPC-201ENST00000259254 SLC25A17O43808 307 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 SIX6O95475 246 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 FAM157CP0CG43 387 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
GYPC-201ENST00000259254 CNTFRP26992 372 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 PLGLAQ15195 96 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 AANATQ16613 207 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 C2orf68Q2NKX9 166 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 CADM3Q8N126 398 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 SIGLECL1Q8N7X8 197 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 GPR146Q96CH1 333 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 ZNF48Q96MX3 618 aaPredicted RBP12.49□□□□□ -0.41
GYPC-201ENST00000259254 RNF5Q99942 180 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 PDCD10Q9BUL8 212 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 TNFRSF19Q9NS68 423 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 TMEM140Q9NV12 185 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
GYPC-201ENST00000259254 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 HMX3A6NHT5 357 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 SRRM4A7MD48 611 aaKnown RBP12.48□□□□□ -0.41
GYPC-201ENST00000259254 NBR2O15453 112 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
GYPC-201ENST00000259254 IGHV4-59P01825 116 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 BCAP31P51572 246 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 UBE2KP61086 200 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 EBI3Q14213 229 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 PSG5Q15238 335 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 IZUMO4Q1ZYL8 232 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 FBLN7Q53RD9 439 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 OR4A47Q6IF82 309 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 TMEM219Q86XT9 240 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 VSTM2AQ8TAG5 236 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
GYPC-201ENST00000259254 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 CHIAQ9BZP6 476 aa12.48□□□□□ -0.41
GYPC-201ENST00000259254 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
GYPC-201ENST00000259254 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms