RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 MDH2P40926 338 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 ODF3L1Q8IXM7 274 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 H1FXQ92522 213 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 TMEM56Q96MV1 263 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 KIAA1456Q9P272 454 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 M0R1X1 148 aa12.2□□□□□ -0.46
TRAFD1-201ENST00000257604 CLDN14O95500 239 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 OR4A8P0C604 315 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 HIST1H1BP16401 226 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 GPR12P47775 334 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 NMSQ5H8A3 153 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 CEBPZOSA8MTT3 80 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 CCKARP32238 428 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 GLRXP35754 106 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 CD200P41217 278 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 ADIRFQ15847 76 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 ZNF585BQ52M93 769 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
TRAFD1-201ENST00000257604 ODAMA1E959 279 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 KITLGP21583 273 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 KRTCAP3Q53RY4 240 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 TMEM108Q6UXF1 575 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 OR5D13Q8NGL4 314 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 LIN7CQ9NUP9 197 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 BTBD17A6NE02 478 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 LINC00473A8K010 186 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 LYNX1G3V0Z9 82 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 PITX3O75364 302 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 LYNX1P0DP58 116 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 IRF2P14316 349 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 MAS1LP35410 378 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 DLX1P56177 255 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 MOB1BQ7L9L4 216 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 SFXN3Q9BWM7 321 aa12.18□□□□□ -0.46
TRAFD1-201ENST00000257604 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 ARHGAP32A7KAX9 2087 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 SMCO3A2RU48 225 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 DPRXA6NFQ7 191 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 J3QW42 95 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 TCAPO15273 167 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 SYNGR2O43760 224 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 DDTP30046 118 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 TMEM37Q8WXS4 190 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 C5orf30Q96GV9 206 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 SLC25A31Q9H0C2 315 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 MYO18BQ8IUG5 2567 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 SLC31A2O15432 143 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 CD33P20138 364 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 TIMP3P35625 211 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 NCR3LG1Q68D85 454 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 H2BFWTQ7Z2G1 175 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 FAM90A1Q86YD7 464 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 LYG1Q8N1E2 194 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 RND1Q92730 232 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
TRAFD1-201ENST00000257604 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 CLEC18AA5D8T8 446 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 SFTPCP11686 197 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 REG1BP48304 166 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 SCGB1C1Q8TD33 95 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 RPRMQ9NS64 109 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 IFNA5P01569 189 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 TLE4Q04727 773 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 ARL16Q0P5N6 197 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 Q6ZS49 121 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 GATAD1Q8WUU5 269 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 HIST1H2BLQ99880 126 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 MBNL3Q9NUK0 354 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-201ENST00000257604 A0A1B0GW64 132 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 ZG16O60844 167 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 ID3Q02535 119 aa12.15□□□□□ -0.46
TRAFD1-201ENST00000257604 C1orf87Q8N0U7 546 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms