RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ZNF729A6NN14 1252 aaPredicted RBP13.07□□□□□ -0.32
RFX1-201ENST00000254325 TCF19Q9Y242 345 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 TFF3Q07654 80 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 COL6A6A6NMZ7 2263 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 LOC102723971A0A1B0GUV8 181 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 CLEC12BQ2HXU8 276 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 ZNF714Q96N38 554 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 C17orf100A8MU93 164 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 PAGE4O60829 102 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 OR9G9P0C7N8 305 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 CTRB1P17538 263 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 S100A12P80511 92 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 ERHP84090 104 aaKnown RBP13.06□□□□□ -0.32
RFX1-201ENST00000254325 TMEM241Q24JQ0 296 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
RFX1-201ENST00000254325 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
RFX1-201ENST00000254325 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
RFX1-201ENST00000254325 ICAM4Q14773 271 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 CORO2AQ92828 525 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 NBL1P41271 181 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 RAB24Q969Q5 203 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 OR51B2Q9Y5P1 312 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 CLDN34H7C241 214 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 J3QR06 171 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
RFX1-201ENST00000254325 STUMQ69YW2 141 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 HARBI1Q96MB7 349 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 PRNDQ9UKY0 176 aa13.05□□□□□ -0.32
RFX1-201ENST00000254325 SLC24A4Q8NFF2 622 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 TMPRSS5Q9H3S3 457 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 GAB2Q9UQC2 676 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 SAA2-SAA4A0A096LPE2 208 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 CCL21O00585 134 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 SAA2P0DJI9 122 aaPredicted RBP13.04□□□□□ -0.32
RFX1-201ENST00000254325 PNRC1Q12796 327 aaPredicted RBP13.04□□□□□ -0.32
RFX1-201ENST00000254325 TBR1Q16650 682 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 OR13D1Q8NGV5 346 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 FRYLO94915 3013 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
RFX1-201ENST00000254325 TMEM14EPQ6UXP3 125 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 NPCDR1Q9BY65 106 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
RFX1-201ENST00000254325 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 SPSB3Q6PJ21 355 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
RFX1-201ENST00000254325 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 SLC31A2O15432 143 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 RD3LP0DJH9 198 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
RFX1-201ENST00000254325 MRPL41Q8IXM3 137 aaKnown RBP13.03□□□□□ -0.32
RFX1-201ENST00000254325 C22orf15Q8WYQ4 148 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 NEIL1Q96FI4 390 aaPredicted RBP13.03□□□□□ -0.32
RFX1-201ENST00000254325 UHRF2Q96PU4 802 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 IGLV2-14P01704 120 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 MSMPQ1L6U9 139 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 CA5BP1Q8WTZ4 195 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 ABCA4P78363 2273 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
RFX1-201ENST00000254325 C11orf94C9JXX5 98 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
RFX1-201ENST00000254325 B2MP61769 119 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 PRR30Q53SZ7 412 aaPredicted RBP13.02□□□□□ -0.32
RFX1-201ENST00000254325 ZNF251Q9BRH9 671 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 NAT8Q9UHE5 227 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 DPRXA6NFQ7 191 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 TM4SF5O14894 197 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 FABP9Q0Z7S8 132 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 MIC13Q5XKP0 118 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 OR4A47Q6IF82 309 aa13.02□□□□□ -0.32
RFX1-201ENST00000254325 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 C15orf65H3BRN8 121 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 CCL3L1P16619 93 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 HNF1AP20823 631 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 DUX4L9Q6RFH8 374 aaPredicted RBP13.02□□□□□ -0.33
RFX1-201ENST00000254325 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 FLYWCH2Q96CP2 140 aaKnown RBP13.02□□□□□ -0.33
RFX1-201ENST00000254325 NPVFQ9HCQ7 196 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 OR7C2O60412 319 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.33
RFX1-201ENST00000254325 BSXQ3C1V8 233 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.33
RFX1-201ENST00000254325 B4DEV8 164 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 DEFA6Q01524 100 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms