RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 H1FOOQ8IZA3 346 aaPredicted RBP7.81□□□□□ -1.16
VPS50-201ENST00000251739 Q8N402 240 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 TEX45Q8NA69 505 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 OR10R2Q8NGX6 335 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 OR10J5Q8NHC4 309 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 NRG4Q8WWG1 115 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
VPS50-201ENST00000251739 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 RAB3CQ96E17 227 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 MGLLQ99685 303 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 NKX1-2Q9UD57 310 aaPredicted RBP7.81□□□□□ -1.16
VPS50-201ENST00000251739 ZNF230Q9UIE0 474 aaPredicted RBP7.81□□□□□ -1.16
VPS50-201ENST00000251739 RAB22AQ9UL26 194 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 TRAV1-2A0A0B4J238 106 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 MSGN1A6NI15 193 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 OR9G9P0C7N8 305 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 HSMCR30P0CW71 290 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 APELAP0DMC3 54 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 HIST1H1DP16402 221 aaKnown RBP7.8□□□□□ -1.16
VPS50-201ENST00000251739 CRHBPP24387 322 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 SSX1Q16384 188 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 RPEL1Q2QD12 228 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 HES5Q5TA89 166 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 PRSS48Q7RTY5 328 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 LAX1Q8IWV1 398 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 OR2K2Q8NGT1 345 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 OSR1Q8TAX0 266 aaPredicted RBP7.8□□□□□ -1.16
VPS50-201ENST00000251739 MAFIPQ8WZ33 124 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 ADTRPQ96IZ2 230 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 ACOT13Q9NPJ3 140 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 AKIP1Q9NQ31 210 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 COA4Q9NYJ1 87 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 TPRKBQ9Y3C4 175 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 DMRT1Q9Y5R6 373 aa7.8□□□□□ -1.16
VPS50-201ENST00000251739 FAM223BA6NKX1 122 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 IFITM5A6NNB3 132 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 CRYZL1O95825 349 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 SAA1P0DJI8 122 aaPredicted RBP7.79□□□□□ -1.16
VPS50-201ENST00000251739 GNB3P16520 340 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 RANBP1P43487 201 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 MAP2K4P45985 399 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 OR10A3P58181 314 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 RHOGP84095 191 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 CBX3Q13185 183 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 EXOSC2Q13868 293 aaKnown RBP7.79□□□□□ -1.16
VPS50-201ENST00000251739 TBCEQ15813 527 aaPredicted RBP7.79□□□□□ -1.16
VPS50-201ENST00000251739 TNXAQ16473 311 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 IDO2Q6ZQW0 420 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 GTSCR1Q86UQ5 136 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 NR2C2APQ86WQ0 139 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 FAM223AQ8IWN6 122 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 SNAPC3Q92966 411 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 HIPK2Q9H2X6 1198 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 ZNF430Q9H8G1 570 aaPredicted RBP7.79□□□□□ -1.16
VPS50-201ENST00000251739 ZC4H2Q9NQZ6 224 aa7.79□□□□□ -1.16
VPS50-201ENST00000251739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.78□□□□□ -1.16
VPS50-201ENST00000251739 ZNF785A8K8V0 405 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 TEX22C9J3V5 150 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 AIREO43918 545 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 IGLV2-14P01704 120 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 DTYMKP23919 212 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 GADD45AP24522 165 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 MRPS15P82914 257 aaKnown RBP7.78□□□□□ -1.16
VPS50-201ENST00000251739 EIF4EBP1Q13541 118 aaPredicted RBP7.78□□□□□ -1.16
VPS50-201ENST00000251739 CDK10Q15131 360 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 KLK9Q2XQG4 91 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 C10orf55Q5SWW7 151 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 TTC9CQ8N5M4 171 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 RETNQ9HD89 108 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 NDUFB11Q9NX14 153 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 KLK9Q9UKQ9 250 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 ELF5Q9UKW6 265 aaPredicted RBP7.78□□□□□ -1.16
VPS50-201ENST00000251739 CEPT1Q9Y6K0 416 aa7.78□□□□□ -1.16
VPS50-201ENST00000251739 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 A0A0B4J203 849 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 A0A1B0GW64 132 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 PRH1P02810 166 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 BRWD1-AS2P59051 145 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 RPL30P62888 115 aaKnown RBP7.77□□□□□ -1.17
VPS50-201ENST00000251739 TATDN3Q17R31 274 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 CD300EQ496F6 205 aaPredicted RBP7.77□□□□□ -1.17
VPS50-201ENST00000251739 ZNF367Q7RTV3 350 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 MMD2Q8IY49 270 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 ZNF645Q8N7E2 425 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 ACOT12Q8WYK0 555 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 PHB2Q99623 299 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 SPIN2AQ99865 258 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 SPIN2BQ9BPZ2 258 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 GINS4Q9BRT9 223 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 CENPOQ9BU64 300 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 PLEKHA3Q9HB20 300 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 BLOC1S6Q9UL45 172 aa7.77□□□□□ -1.17
VPS50-201ENST00000251739 A0A075B6Q4 140 aa7.76□□□□□ -1.17
VPS50-201ENST00000251739 IGKV1D-13A0A0B4J2D9 117 aa7.76□□□□□ -1.17
VPS50-201ENST00000251739 TRDV1A0A1B0GX56 115 aa7.76□□□□□ -1.17
VPS50-201ENST00000251739 RBMY1BA6NDE4 496 aaKnown RBP7.76□□□□□ -1.17
VPS50-201ENST00000251739 RBMY1EA6NEQ0 496 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms