RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 RAB39BQ96DA2 213 aa18.82■□□□□ 0.6
HOXD9-201ENST00000249499 ZNF714Q96N38 554 aa18.82■□□□□ 0.6
HOXD9-201ENST00000249499 FBXO7Q9Y3I1 522 aa18.82■□□□□ 0.6
HOXD9-201ENST00000249499 RFNGQ9Y644 331 aa18.82■□□□□ 0.6
HOXD9-201ENST00000249499 SPTA1P02549 2419 aa18.81■□□□□ 0.6
HOXD9-201ENST00000249499 DIDO1Q9BTC0 2240 aaKnown RBP18.81■□□□□ 0.6
HOXD9-201ENST00000249499 POLEQ07864 2286 aa18.81■□□□□ 0.6
HOXD9-201ENST00000249499 TAF15Q92804 592 aaKnown RBP eCLIP18.81■□□□□ 0.6
HOXD9-201ENST00000249499 NEUROG1Q92886 237 aa18.81■□□□□ 0.6
HOXD9-201ENST00000249499 BBC3Q96PG8 261 aaPredicted RBP18.81■□□□□ 0.6
HOXD9-201ENST00000249499 QTRT1Q9BXR0 403 aaKnown RBP18.81■□□□□ 0.6
HOXD9-201ENST00000249499 IGHV3-7P01780 117 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 LY6DQ14210 128 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 VWC2Q2TAL6 325 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 DHRS7BQ6IAN0 325 aaPredicted RBP18.8■□□□□ 0.6
HOXD9-201ENST00000249499 C1orf229Q6ZS94 237 aaPredicted RBP18.8■□□□□ 0.6
HOXD9-201ENST00000249499 C8orf31Q8N9H6 132 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 LINC01560Q8TB33 94 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 LEAP2Q969E1 77 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 CLCC1Q96S66 551 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 CISD1Q9NZ45 108 aaKnown RBP18.8■□□□□ 0.6
HOXD9-201ENST00000249499 ICE1Q9Y2F5 2266 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 IGHV1-69-2A0A0G2JMI3 117 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 ADORA2A-AS1P86434 159 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 RELBQ01201 579 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 UTF1Q5T230 341 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 OR8G2PQ6IF36 304 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 ZDHHC16Q969W1 377 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 TMEM140Q9NV12 185 aa18.8■□□□□ 0.6
HOXD9-201ENST00000249499 MMP23AO75900 390 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 IFNA17P01571 189 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 ARG1P05089 322 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 ZNF383Q8NA42 475 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 RSG1Q9BU20 258 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 SLC35B3Q9H1N7 401 aa18.79■□□□□ 0.6
HOXD9-201ENST00000249499 HRASP01112 189 aa18.78■□□□□ 0.6
HOXD9-201ENST00000249499 PPT1P50897 306 aa18.78■□□□□ 0.6
HOXD9-201ENST00000249499 AIFM2Q9BRQ8 373 aa18.78■□□□□ 0.6
HOXD9-201ENST00000249499 CFAP46Q8IYW2 2715 aa18.78■□□□□ 0.6
HOXD9-201ENST00000249499 A0A1W2PPE3 182 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 FAM74A7A6NL05 159 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 NUPL2O15504 423 aaKnown RBP18.77■□□□□ 0.6
HOXD9-201ENST00000249499 FAM74A3Q4VXF1 159 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 TMEM200BQ69YZ2 307 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 FAM71F2Q6NXP2 309 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 MBD3L1Q8WWY6 194 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 UBE2L5PA0A1B0GUS4 154 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 RBFOX3A6NFN3 312 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 GPR37O15354 613 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 GNG10P50151 68 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 HFEQ30201 348 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 ZNF672Q499Z4 452 aaPredicted RBP18.77■□□□□ 0.6
HOXD9-201ENST00000249499 TMEM41BQ5BJD5 291 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 ZNF833PQ6ZTB9 187 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 ZNF596Q8TC21 504 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 SFT2D1Q8WV19 159 aa18.77■□□□□ 0.6
HOXD9-201ENST00000249499 UNKLQ9H9P5 680 aaKnown RBP18.77■□□□□ 0.6
HOXD9-201ENST00000249499 FOXA2Q9Y261 457 aaPredicted RBP18.77■□□□□ 0.6
HOXD9-201ENST00000249499 LOC105371267A0A1B0GV96 52 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 C15orf61A6NNL5 157 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 FCN3O75636 299 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 OR2B8PP59922 312 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 RTL8BQ17RB0 113 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 SSX9Q7RTT3 188 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 MUC15Q8N387 334 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 LINC00311Q8N616 119 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 CLRN3Q8NCR9 226 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 RHOVQ96L33 236 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 TMEM204Q9BSN7 226 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 RPRMQ9NS64 109 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 HCFC1P51610 2035 aa18.76■□□□□ 0.59
HOXD9-201ENST00000249499 C15orf62A8K5M9 175 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 SOX15O60248 233 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 VDAC2P45880 294 aaPredicted RBP18.75■□□□□ 0.59
HOXD9-201ENST00000249499 CA5BP1Q8WTZ4 195 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 GGACTQ9BVM4 153 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 COL6A6A6NMZ7 2263 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 TRBV23-1A0A0A0MS06 115 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 DVL1O14640 695 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 PLAUP00749 431 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 MBP02144 154 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 ATF4P18848 351 aaPredicted RBP18.75■□□□□ 0.59
HOXD9-201ENST00000249499 NPBWR1P48145 328 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 PPOXP50336 477 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 LYPD2Q6UXB3 125 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 CTSZQ9UBR2 303 aa18.75■□□□□ 0.59
HOXD9-201ENST00000249499 CT45A6P0DMU7 189 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 CT45A5P0DMU8 189 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 CT45A7P0DMV0 189 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 MDKP21741 143 aaPredicted RBP18.74■□□□□ 0.59
HOXD9-201ENST00000249499 CCL20P78556 96 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 ZNF506Q5JVG8 444 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 OR4A47Q6IF82 309 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 TMEM14BQ9NUH8 114 aa18.74■□□□□ 0.59
HOXD9-201ENST00000249499 SIAH2O43255 324 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 IL6RP08887 468 aaPredicted RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 LOXP28300 417 aaPredicted RBP18.73■□□□□ 0.59
HOXD9-201ENST00000249499 VKORC1L1Q8N0U8 176 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 TCF19Q9Y242 345 aa18.73■□□□□ 0.59
HOXD9-201ENST00000249499 A0A087X0M5 115 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms