RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C5orf51A6NDU8 294 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 H7C2Y5 167 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 TIMM23O14925 209 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 S1PR2O95136 353 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 LY86O95711 162 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 IL6RP08887 468 aaPredicted RBP10.42□□□□□ -0.74
LSM8-201ENST00000249299 HOXB5P09067 269 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 FBP1P09467 338 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 FAM106CPP0CH98 169 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 IL15RAQ13261 267 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 DIAPH2-AS1Q14236 149 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 SSX2Q16385 188 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 IAH1Q2TAA2 248 aaPredicted RBP10.42□□□□□ -0.74
LSM8-201ENST00000249299 AARDQ4LEZ3 155 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 KLF17Q5JT82 389 aaPredicted RBP10.42□□□□□ -0.74
LSM8-201ENST00000249299 THOC7Q6I9Y2 204 aaKnown RBP10.42□□□□□ -0.74
LSM8-201ENST00000249299 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 R3HDM4Q96D70 268 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 ST6GAL2Q96JF0 529 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 MS4A7Q9GZW8 240 aaPredicted RBP10.42□□□□□ -0.74
LSM8-201ENST00000249299 BET1LQ9NYM9 111 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 ARHGAP32A7KAX9 2087 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 SHOXO15266 292 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 PITX3O75364 302 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 ADAP1O75689 374 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 VENTXO95231 258 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 MOSP00540 346 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 KRASP01116 189 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 IGKV1-16P04430 117 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 PET100P0DJ07 73 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 LINC00205P59089 165 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 UBE2KP61086 200 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 PRB3Q04118 309 aaPredicted RBP10.41□□□□□ -0.74
LSM8-201ENST00000249299 SMCO1Q147U7 214 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 C2orf68Q2NKX9 166 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 OR2B11Q5JQS5 317 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 FOXRED2Q8IWF2 684 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 TEX45Q8NA69 505 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 OR2T10Q8NGZ9 312 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
LSM8-201ENST00000249299 HARBI1Q96MB7 349 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 FYTTD1Q96QD9 318 aaKnown RBP10.41□□□□□ -0.74
LSM8-201ENST00000249299 RANBP3Q9H6Z4 567 aaPredicted RBP10.41□□□□□ -0.74
LSM8-201ENST00000249299 PRR13Q9NZ81 148 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 FAM96BQ9Y3D0 163 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 BAHCC1Q9P281 2608 aa10.41□□□□□ -0.74
LSM8-201ENST00000249299 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 A8MV72 311 aaPredicted RBP10.4□□□□□ -0.74
LSM8-201ENST00000249299 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.74
LSM8-201ENST00000249299 CD83Q01151 205 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 KRTAP1-1Q07627 177 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 SCGB2A2Q13296 93 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 VMA21Q3ZAQ7 101 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
LSM8-201ENST00000249299 ZNF429Q86V71 674 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 PDZD9Q8IXQ8 264 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 ZBTB8BQ8NAP8 495 aaPredicted RBP10.4□□□□□ -0.74
LSM8-201ENST00000249299 DMBX1Q8NFW5 382 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 OR52E5Q8NH55 327 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 GPR146Q96CH1 333 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.4□□□□□ -0.74
LSM8-201ENST00000249299 FKBP11Q9NYL4 201 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 ITGB1BP2Q9UKP3 347 aa10.4□□□□□ -0.74
LSM8-201ENST00000249299 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 SMAD7O15105 426 aaKnown RBP10.39□□□□□ -0.75
LSM8-201ENST00000249299 HNF1AP20823 631 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 G6PCP35575 357 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 ID3Q02535 119 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 PUSL1Q8N0Z8 303 aaKnown RBP10.39□□□□□ -0.75
LSM8-201ENST00000249299 NPBQ8NG41 125 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 OR4D5Q8NGN0 318 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 RANGRFQ9HD47 186 aaPredicted RBP10.39□□□□□ -0.75
LSM8-201ENST00000249299 C1RLQ9NZP8 487 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 ZNF257Q9Y2Q1 563 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 FLNAP21333 2647 aaKnown RBP10.39□□□□□ -0.75
LSM8-201ENST00000249299 ABCA1O95477 2261 aa10.39□□□□□ -0.75
LSM8-201ENST00000249299 CR1P17927 2039 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 SRRM4A7MD48 611 aaKnown RBP10.38□□□□□ -0.75
LSM8-201ENST00000249299 CCSO14618 274 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 NDUFA3O95167 84 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 PSMB6P28072 239 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 MAS1LP35410 378 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 OR4A47Q6IF82 309 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 DYNAPQ8N1N2 210 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 Q8N6K4 173 aa10.38□□□□□ -0.75
LSM8-201ENST00000249299 OR2T35Q8NGX2 323 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms