RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SPCS2Q15005 226 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 PRSS8Q16651 343 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 PDLIM3Q53GG5 364 aaPredicted RBP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 OR2B11Q5JQS5 317 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 UNQ5815/PRO19632Q6UWF5 114 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 DHRS11Q6UWP2 260 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 REC114Q7Z4M0 266 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 TMEM17Q86X19 198 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 SNX29P2Q8IUI4 249 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 MFSD4AQ8N468 514 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 ZNF491Q8N8L2 437 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 LFNGQ8NES3 379 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 RAX2Q96IS3 184 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 CCL28Q9NRJ3 127 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 EXTL2Q9UBQ6 330 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 A3GALT2U3KPV4 340 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 WIPF1O43516 503 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 CNIH1O95406 144 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 BRI3O95415 125 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 HRH1P35367 487 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 GNB1P62873 340 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 MRGPRG-AS1Q2M3A8 158 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 DEFB136Q30KP8 78 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 ZNF2Q9BSG1 426 aaPredicted RBP9.94□□□□□ -0.82
VPREB3-201ENST00000248948 DCUN1D5Q9BTE7 237 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 FXYD6Q9H0Q3 95 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
VPREB3-201ENST00000248948 TNFSF12O43508 249 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 KBTBD11O94819 623 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 PMP2P02689 132 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 IGLL1P15814 213 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 TBPP20226 339 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 RFX2P48378 723 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 MRPS10P82664 201 aaKnown RBP9.93□□□□□ -0.82
VPREB3-201ENST00000248948 PJVKQ0ZLH3 352 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 KIAA0141Q14154 515 aaPredicted RBP9.93□□□□□ -0.82
VPREB3-201ENST00000248948 VAX1Q5SQQ9 334 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 IDO2Q6ZQW0 420 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 ZNF818PQ6ZRF7 136 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 LAX1Q8IWV1 398 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 POC5Q8NA72 575 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 OR6F1Q8NGZ6 308 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
VPREB3-201ENST00000248948 DPF1Q92782 380 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 ISOC1Q96CN7 298 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 AIFM2Q9BRQ8 373 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 ZNF430Q9H8G1 570 aaPredicted RBP9.93□□□□□ -0.82
VPREB3-201ENST00000248948 GNB4Q9HAV0 340 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 SCOCQ9UIL1 159 aa9.93□□□□□ -0.82
VPREB3-201ENST00000248948 H3BMQ9 156 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 I3L521 148 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 RGS5O15539 181 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 ACTL6BO94805 426 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 OR2A4O95047 310 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 HRASP01112 189 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 FGF2P09038 288 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
VPREB3-201ENST00000248948 OR8U8P0C7N1 319 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 HLA-DMAP28067 261 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 GNRHRP30968 328 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 BRWD1-AS2P59051 145 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 TPPP2P59282 170 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 TAS2R31P59538 309 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 TNXAQ16473 311 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 AADACL3Q5VUY0 350 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 LYSMD2Q8IV50 215 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 CMTM1Q8IZ96 169 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 SPAG16Q8N0X2 631 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 PUSL1Q8N0Z8 303 aaKnown RBP9.92□□□□□ -0.82
VPREB3-201ENST00000248948 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 RHOVQ96L33 236 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 PHB2Q99623 299 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 MIXL1Q9H2W2 232 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 RABL2AQ9UBK7 228 aaPredicted RBP9.92□□□□□ -0.82
VPREB3-201ENST00000248948 RABL2BQ9UNT1 228 aa9.92□□□□□ -0.82
VPREB3-201ENST00000248948 GPR31O00270 319 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 RAMP3O60896 148 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 HPRT1P00492 218 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 RLN1P04808 185 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 MAS1LP35410 378 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 SSBP1Q04837 148 aaKnown RBP9.91□□□□□ -0.82
VPREB3-201ENST00000248948 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 POU2AF1Q16633 256 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 FOXB2Q5VYV0 432 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 LPCAT3Q6P1A2 487 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 ARRDC1Q8N5I2 433 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 GPHA2Q96T91 129 aa9.91□□□□□ -0.82
VPREB3-201ENST00000248948 SPIN2AQ99865 258 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms