RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 VSTM2AQ8TAG5 236 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 ITLN1Q8WWA0 313 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 ARL2-SNX15V9GYD0 113 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 ALPK3Q96L96 1907 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 HSBP1O75506 76 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 RBP4P02753 201 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 UBE2G1P62253 170 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 SERF2P84101 59 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 SGMS2Q8NHU3 365 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 NUDT11Q96G61 164 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 RCC1LQ96I51 464 aaKnown RBP9.37□□□□□ -0.91
COPA-201ENST00000241704 ABHD14BQ96IU4 210 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
COPA-201ENST00000241704 OOEPA6NGQ2 149 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 VDAC1P21796 283 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 LGALS7P47929 136 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 KCNMB1Q16558 191 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 PLAC9Q5JTB6 97 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 FAM57AQ8TBR7 257 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 RNF2Q99496 336 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 PIMREGQ9BSJ6 248 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.36□□□□□ -0.91
COPA-201ENST00000241704 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
COPA-201ENST00000241704 ZNF331Q9NQX6 463 aaPredicted RBP9.36□□□□□ -0.91
COPA-201ENST00000241704 ELOVL5Q9NYP7 299 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 A0A0G2JMM0 328 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 A0A1W2PN81 502 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 A0A1W2PPB8 328 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 A0A1W2PRS3 328 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 KIR3DP1A8MWS1 328 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 ZNHIT1O43257 154 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 FGF12P61328 243 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 FAM27E3Q08E93 113 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 MMDQ15546 238 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 CCDC144NLQ6NUI1 221 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 RBKSQ9H477 322 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 UBE2V1Q13404 147 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 OR10G8Q8NGN5 311 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 CCL13Q99616 98 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 NDFIP1Q9BT67 221 aa9.36□□□□□ -0.91
COPA-201ENST00000241704 WNK2Q9Y3S1 2297 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 SYNGR3O43761 229 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OPRK1P41145 380 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 TNXAQ16473 311 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 ACSM6Q6P461 480 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 Q6ZT83 130 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 TBC1D26Q86UD7 250 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 HDHD3Q9BSH5 251 aaPredicted RBP9.35□□□□□ -0.91
COPA-201ENST00000241704 RSG1Q9BU20 258 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 MRPL13Q9BYD1 178 aaKnown RBP9.35□□□□□ -0.91
COPA-201ENST00000241704 PARLQ9H300 379 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 IL19Q9UHD0 177 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 CADP27708 2225 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 ZNF253O75346 499 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 DOLPP1Q86YN1 238 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 CCL19Q99731 98 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 USF3Q68DE3 2245 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 ZNF785A8K8V0 405 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 TMEM50BP56557 158 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 WDR73Q6P4I2 378 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 WDYHV1Q96HA8 205 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 HSPB7Q9UBY9 170 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 CACNG5Q9UF02 275 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 PLXNA4Q9HCM2 1894 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 RALGAPA1Q6GYQ0 2036 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A10PA6NDY2 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A18PA6NE21 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A16PA6NEW6 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A20PA6NIJ5 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A7PA6NKC0 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A22PA8MWA6 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A12PA8MX19 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A5PA8MXJ8 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A23PA8MXZ1 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 TMEM250H0YL14 139 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A15PP0C7V4 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A14PP0C7W9 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 FAM90A24PP0C7X0 464 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 PRDX2P32119 198 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 CDKN1BP46527 198 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 SELENOTP62341 195 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 SLC38A11Q08AI6 406 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 MYPOPQ86VE0 399 aaPredicted RBP9.35□□□□□ -0.91
COPA-201ENST00000241704 GAPTQ8N292 157 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OR1L6Q8NGR2 347 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 ZNF488Q96MN9 340 aa9.35□□□□□ -0.91
COPA-201ENST00000241704 OR2W1Q9Y3N9 320 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms