RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
CTSD-201ENST00000236671 RNASEH2CQ8TDP1 164 aaKnown RBP12.94□□□□□ -0.34
CTSD-201ENST00000236671 ANAPC16Q96DE5 110 aa12.94□□□□□ -0.34
CTSD-201ENST00000236671 DIRC2Q96SL1 478 aa12.94□□□□□ -0.34
CTSD-201ENST00000236671 IGHV3-43A0A0B4J1X8 118 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
CTSD-201ENST00000236671 MARCH11A6NNE9 402 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 RBMXL2O75526 392 aaKnown RBP12.93□□□□□ -0.34
CTSD-201ENST00000236671 WISP2O76076 250 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 VENTXO95231 258 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 IGHV3-43DP0DP04 118 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 NPPCP23582 126 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 FAM3BP58499 235 aaPredicted RBP12.93□□□□□ -0.34
CTSD-201ENST00000236671 Q3ZCU0 254 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 TPRX1Q8N7U7 411 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
CTSD-201ENST00000236671 A0A1W2PPQ1 181 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 ZNF891A8MT65 544 aaPredicted RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 CDC34P49427 236 aaPredicted RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 ACTL10Q5JWF8 245 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 HSD17B10Q99714 261 aaKnown RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 QTRT1Q9BXR0 403 aaKnown RBP12.92□□□□□ -0.34
CTSD-201ENST00000236671 CLCF1Q9UBD9 225 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 XKRY2A2RUG3 117 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 C11orf94C9JXX5 98 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 K7ENP7 123 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 DVL1O14640 695 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 DDTP30046 118 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 ARG2P78540 354 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 LURAP1Q96LR2 239 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 PRO1933Q9H354 126 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 PSG11Q9UQ72 335 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 WDR83OSQ9Y284 106 aa12.92□□□□□ -0.34
CTSD-201ENST00000236671 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 DEFB108AA8MXU0 73 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 TSTD3H0UI37 97 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 PAX1P15863 534 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 SRP14P37108 136 aaKnown RBP12.91□□□□□ -0.34
CTSD-201ENST00000236671 PDLIM4P50479 330 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 ACOT6Q3I5F7 207 aaPredicted RBP12.91□□□□□ -0.34
CTSD-201ENST00000236671 ZNF600Q6ZNG1 722 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 Q6ZT83 130 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 WDR31Q8NA23 367 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 RFESDQ8TAC1 157 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 K7EM74 188 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 AGFG2O95081 481 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 IGKV3-15P01624 115 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 TYMSP04818 313 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 GZMBP10144 247 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 CCL11P51671 97 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 FOXF2Q12947 444 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 AARDQ4LEZ3 155 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 OR2T10Q8NGZ9 312 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 R3HDM4Q96D70 268 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 ACY3Q96HD9 319 aa12.91□□□□□ -0.34
CTSD-201ENST00000236671 SVILO95425 2214 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 REC114Q7Z4M0 266 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 OR6C3Q9NZP0 311 aa12.9□□□□□ -0.34
CTSD-201ENST00000236671 COL6A6A6NMZ7 2263 aa12.9□□□□□ -0.35
CTSD-201ENST00000236671 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 IFNA10P01566 189 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 CD1BP29016 333 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 TMPRSS3P57727 454 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 GNB1P62873 340 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 HTD2P86397 168 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 LINC01551Q86U37 167 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 FZR1Q9UM11 496 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 RP1L1Q8IWN7 2480 aaPredicted RBP12.89□□□□□ -0.35
CTSD-201ENST00000236671 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
CTSD-201ENST00000236671 PROP1O75360 226 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 CRYAAP02489 173 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 KITLGP21583 273 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 DUTP33316 252 aaKnown RBP12.89□□□□□ -0.35
CTSD-201ENST00000236671 FDCSPQ8NFU4 85 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 RAB1CQ92928 201 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 MSL2Q9HCI7 577 aa12.89□□□□□ -0.35
CTSD-201ENST00000236671 A0A087X0M5 115 aa12.88□□□□□ -0.35
CTSD-201ENST00000236671 A0A1B0GX30 115 aa12.88□□□□□ -0.35
CTSD-201ENST00000236671 TMPRSS2O15393 492 aa12.88□□□□□ -0.35
CTSD-201ENST00000236671 SPINT2O43291 252 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms