RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 NXF5Q9H1B4 397 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 SPANXB1Q9NS25 103 aaPredicted RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 SERTAD4Q9NUC0 356 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SIGLEC8Q9NYZ4 499 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TAAR3PQ9P1P4 343 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 MED19A0JLT2 244 aaPredicted RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PRSS29PA6NIE9 313 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 KIAA1324LA8MWY0 1029 aaPredicted RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 DHHO43323 396 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SLC25A6P12236 298 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 HIST1H1CP16403 213 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 IGFBP2P18065 325 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 USF1P22415 310 aaPredicted RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 MFAP4P55083 255 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CLDN6P56747 220 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TMPRSS3P57727 454 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 OR1D5P58170 312 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 NANOS3P60323 173 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 ZXDAP98168 799 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 ZNF627Q7L945 461 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SMRP1Q8NCR6 262 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 OR51T1Q8NGJ9 327 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 OR10AG1Q8NH19 301 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 MRPL30Q8TCC3 161 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 GPER1Q99527 375 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 ULBP3Q9BZM4 244 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 RTN4RQ9BZR6 473 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CLCF1Q9UBD9 225 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SDK2Q58EX2 2172 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CENPVL3A0A0U1RRI6 287 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 A0A1W2PS18 150 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 LIPT2A6NK58 231 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 F8W1H4 67 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 H3BMH7 237 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 FOXS1O43638 330 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CEACAM4O75871 244 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CA2P00918 260 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 CFIP05156 583 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 FBLP22087 321 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 CFHR2P36980 270 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 FUT7Q11130 342 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 DMRTC1Q5HYR2 192 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TRAPPC6BQ86SZ2 158 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 TM4SF19Q96DZ7 209 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 GGTLC1Q9BX51 225 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PPDPFQ9H3Y8 114 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 PRTFDC1Q9NRG1 225 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 GNG13Q9P2W3 67 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 RCL1Q9Y2P8 373 aaKnown RBP4.82□□□□□ -1.64
RFX4-201ENST00000229387 FRYQ5TBA9 3013 aa4.82□□□□□ -1.64
RFX4-201ENST00000229387 LOC102725191A0A1B0GVB3 256 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 A0A1W2PQM1 296 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 LRRC3CA6NJW4 275 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 FABP5P3A8MUU1 101 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 ZNF324O75467 553 aaPredicted RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE7O76087 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 UTS2O95399 124 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE12FP0CL80 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE12GP0CL81 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE12IP0CL82 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 VDAC1P21796 283 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 NPY1RP25929 384 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 CRYBB3P26998 211 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 SFTPDP35247 375 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 KIR2DS4P43632 304 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 MEF2CQ06413 473 aaPredicted RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 GAGE4Q13068 117 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 ADGRE4PQ86SQ3 457 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 CDRT4Q8N9R6 151 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 EMG1Q92979 244 aaKnown RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 BORCS7Q96B45 105 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 ERRFI1Q9UJM3 462 aaPredicted RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 RALYQ9UKM9 306 aaKnown RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 POLR1DQ9Y2S0 133 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 LSM5Q9Y4Y9 91 aaKnown RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 RP1P56715 2156 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 A0A1W2PPM0 123 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 SMIM9A6NGZ8 99 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 DUX1O43812 170 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 DBIP07108 87 aaKnown RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 SPINK8P0C7L1 97 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 OR3A4PP47883 348 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 ARL4DP49703 201 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 TAS2R46P59540 309 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 RPL11P62913 178 aaKnown RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 MFGE8Q08431 387 aaPredicted RBP4.81□□□□□ -1.64
RFX4-201ENST00000229387 GLYATL3Q5SZD4 288 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 TMEM78Q5T7P6 136 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 GLIPR1L1Q6UWM5 242 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 MOB1BQ7L9L4 216 aa4.81□□□□□ -1.64
RFX4-201ENST00000229387 FAM90A1Q86YD7 464 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms