RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PNRC2Q9NPJ4 139 aaKnown RBP11.65□□□□□ -0.54
NFKB1-201ENST00000226574 OR6C3Q9NZP0 311 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 LYZP61626 148 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 HCP5Q6MZN7 132 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 MRPL18Q9H0U6 180 aaKnown RBP11.65□□□□□ -0.54
NFKB1-201ENST00000226574 ID3Q02535 119 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 IMMP1LQ96LU5 166 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 PRRG2O14669 202 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 CYC1P08574 325 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 HTR1DP28221 377 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 MPV17P39210 176 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 LGALS4P56470 323 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.55
NFKB1-201ENST00000226574 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.55
NFKB1-201ENST00000226574 CBY1Q9Y3M2 126 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 WIPI2Q9Y4P8 454 aa11.65□□□□□ -0.55
NFKB1-201ENST00000226574 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 WNT10AQ9GZT5 417 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 OPN3Q9H1Y3 402 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-201ENST00000226574 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
NFKB1-201ENST00000226574 CCL1P22362 96 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
NFKB1-201ENST00000226574 TNXAQ16473 311 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 ERASQ7Z444 233 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 FADS6Q8N9I5 356 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 PRSS3P2Q8NHM4 247 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 OR5P3Q8WZ94 311 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 RNF2Q99496 336 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 RANBP2P49792 3224 aaKnown RBP11.64□□□□□ -0.55
NFKB1-201ENST00000226574 SPAARA0A1B0GVQ0 90 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 KLK10O43240 276 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 MPZP25189 248 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 ZNF645Q8N7E2 425 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 OR4D5Q8NGN0 318 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 NABP1Q96AH0 204 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 P2RX4Q99571 388 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 GOLT1BQ9Y3E0 138 aa11.64□□□□□ -0.55
NFKB1-201ENST00000226574 A0A0G2JRQ6 117 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 LILRA1O75019 489 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 LRRC75BQ2VPJ9 315 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
NFKB1-201ENST00000226574 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-201ENST00000226574 TMEM140Q9NV12 185 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 PINLYPA6NC86 204 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 K7EQM0 130 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 RPLP1P05386 114 aaKnown RBP11.63□□□□□ -0.55
NFKB1-201ENST00000226574 SRIP30626 198 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 CHRNA10Q9GZZ6 450 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 NDUFB3O43676 98 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 CLEC3BP05452 202 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 ANOS1P23352 680 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 IL3RAP26951 378 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 CTAG1AP78358 180 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 HOXA4Q00056 320 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-201ENST00000226574 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 BCL2L2Q92843 193 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-201ENST00000226574 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 TMEM56-RWDD3S4R434 201 aa11.63□□□□□ -0.55
NFKB1-201ENST00000226574 TRAV24A0A0B4J272 114 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 REG1AP05451 166 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 CYP2G1PQ6ZSU1 146 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 FA2HQ7L5A8 372 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 MUC15Q8N387 334 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-201ENST00000226574 TMEM167BQ9NRX6 74 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 THADAQ6YHU6 1953 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 MED13Q9UHV7 2174 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 OR5AL1P0C617 328 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 BRS3P32247 399 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 RAB7AP51149 207 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 FOXA3P55318 350 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-201ENST00000226574 Q6ZRM9 215 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 OR51B2Q9Y5P1 312 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 CACNA1AO00555 2505 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 IGLV3-12A0A075B6K2 115 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 NEURL1O76050 574 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 HPRT1P00492 218 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 GCGP01275 180 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 ADH4P08319 380 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 COL8A1P27658 744 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 NHLH1Q02575 133 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 PRB3Q04118 309 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-201ENST00000226574 KRTCAP3Q53RY4 240 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 FAM214BQ7L5A3 538 aa11.62□□□□□ -0.55
NFKB1-201ENST00000226574 OR13A1Q8NGR1 328 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms