RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DEFA4P12838 97 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
SRP54-201ENST00000216774 GNB1P62873 340 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 PRAMEF5Q5TYX0 476 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 ZNF600Q6ZNG1 722 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 FAM90A1Q86YD7 464 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 OR4A16Q8NH70 328 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 RHOVQ96L33 236 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 MSL2Q9HCI7 577 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 A0A087X0M5 115 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 TRAV38-1A0A0B4J264 116 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 A0A1B0GX30 115 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 YPEL1O60688 119 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 PROP1O75360 226 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 IGLV1-44P01699 117 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 SP9P0CG40 484 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 CD82P27701 267 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 FABP6P51161 128 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 CR1LQ2VPA4 569 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 MORN2Q502X0 79 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 LRRC29Q8WV35 223 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 YPEL2Q96QA6 119 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
SRP54-201ENST00000216774 WDFY4Q6ZS81 3184 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
SRP54-201ENST00000216774 VDAC2P45880 294 aaPredicted RBP11.04□□□□□ -0.64
SRP54-201ENST00000216774 EDDM3BP56851 147 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 ERVK-16P61578 105 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 EDDM3AQ14507 147 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CST9LP1Q5W188 147 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CHODLQ9H9P2 273 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 GNG12Q9UBI6 72 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 GTF3C1Q12789 2109 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 TECTAO75443 2155 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 NDUFB4O95168 129 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CCKARP32238 428 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CHRNA7P36544 502 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 KIR2DS2P43631 304 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 ATP5G3P48201 142 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 FOXL1Q12952 345 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 CLEC12BQ2HXU8 276 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 PPP1R35Q8TAP8 253 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 TMEM37Q8WXS4 190 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
SRP54-201ENST00000216774 DCTN5Q9BTE1 182 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 PRO1933Q9H354 126 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 HEYLQ9NQ87 328 aaPredicted RBP11.04□□□□□ -0.64
SRP54-201ENST00000216774 PTPRBP23467 1997 aa11.04□□□□□ -0.64
SRP54-201ENST00000216774 IGHV2OR16-5A0A0B4J2B6 119 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 M0R1X1 148 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 AQP7O14520 342 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 MGST3O14880 152 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 CXorf1O96002 111 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 CRYAAP02489 173 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 IL3RAP26951 378 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 UBE2G2P60604 165 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 VWA1Q6PCB0 445 aa11.03□□□□□ -0.64
SRP54-201ENST00000216774 IGKV1D-17A0A075B6S4 117 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 SRRM5B3KS81 715 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 F2RL2O00254 374 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 GFRA3O60609 400 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 STAG3L2P0CL84 134 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 STAG3L3P0CL85 134 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 CFHR2P36980 270 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 RELBQ01201 579 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 FAM78BQ5VT40 261 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 C9orf106Q8NAJ2 232 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 Q8TCH9 128 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 MGST2Q99735 147 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.64
SRP54-201ENST00000216774 DIDO1Q9BTC0 2240 aaKnown RBP11.02□□□□□ -0.65
SRP54-201ENST00000216774 TRGV8A0A0C4DH27 118 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 PRR33A8MZF0 331 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 RRHO14718 337 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 ARL14EPLP0DKL9 152 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 CNN1P51911 297 aaKnown RBP11.02□□□□□ -0.65
SRP54-201ENST00000216774 RPL15P61313 204 aaKnown RBP11.02□□□□□ -0.65
SRP54-201ENST00000216774 LTC4SQ16873 150 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
SRP54-201ENST00000216774 FAM169BQ8N8A8 192 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 OR5T1Q8NG75 326 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 S1PR3Q99500 378 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 PLSCR4Q9NRQ2 329 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 MUC3AQ02505 3323 aa11.02□□□□□ -0.65
SRP54-201ENST00000216774 IGHV1-18A0A0C4DH31 117 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 LOXL3P58215 753 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 SSX9Q7RTT3 188 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 IFI27L2Q9H2X8 130 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms