RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PPIAL4CA0A0B4J2A2 164 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 MARCH11A6NNE9 402 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 KIAA1324LA8MWY0 1029 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 RBFOX2O43251 390 aaKnown RBP eCLIP16.07■□□□□ 0.162e-7■■■■□ 22.6
TNFRSF1A-201ENST00000162749 PPIAL4GP0DN37 164 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TET2Q6N021 2002 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 LYPD6BQ8NI32 183 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 S1PR3Q99500 378 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 HELZ2Q9BYK8 2649 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 PRELID3BQ9Y3B1 194 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ABCA12Q86UK0 2595 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 BORCS7-ASMTA0A0B4J1R7 106 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 IGSF23A1L1A6 192 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 C22orf46C9J442 243 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SEC11BP0C7V7 166 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SPP1P10451 314 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 GNB2P62879 340 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ZNF525Q8N782 197 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 C8orf31Q8N9H6 132 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ZNF596Q8TC21 504 aa16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CARHSP1Q9Y2V2 147 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-201ENST00000162749 F8W036 122 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 J3QR06 171 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SSSCA1O60232 199 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 HPRT1P00492 218 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ZNF383Q8NA42 475 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SH3BGRL3Q9H299 93 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 COA4Q9NYJ1 87 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TMEM50AO95807 157 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 THBS3P49746 956 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ZNF833PQ6ZTB9 187 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 LY6G5BQ8NDX9 201 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CCL19Q99731 98 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SSBP3Q9BWW4 388 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TMEM133Q9H2Q1 129 aa16.06■□□□□ 0.16
TNFRSF1A-201ENST00000162749 DOPEY2Q9Y3R5 2298 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 A0A1W2PPH5 198 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TOR1AO14656 332 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 AGPAT2O15120 278 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 IGHV4-39P01824 125 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 F2RL1P55085 397 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SVBPQ8N300 66 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 LINC00311Q8N616 119 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 OR9G1Q8NH87 305 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ABCA2Q9BZC7 2435 aa16.05■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CD5P06127 495 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 KIR2DS2P43631 304 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 DLX1P56177 255 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 R3HDM4Q96D70 268 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ADTRPQ96IZ2 230 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 LYRM2Q9NU23 88 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 A1L4Q6 167 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 C9JQL5 133 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 RNASEK-C17orf49H0YIS7 233 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 RBP4P02753 201 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 LIPFP07098 398 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CT45A6P0DMU7 189 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CT45A5P0DMU8 189 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CT45A7P0DMV0 189 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 FHITP49789 147 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 MIDNQ504T8 468 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ABHD12Q8N2K0 398 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TMEM252Q8N6L7 170 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 OR10X1Q8NGY0 326 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 SEC11CQ9BY50 192 aa16.04■□□□□ 0.16
TNFRSF1A-201ENST00000162749 WRBO00258 174 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CHST1O43916 411 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 PVALBP20472 110 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CTAG1AP78358 180 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 H2BFWTQ7Z2G1 175 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 OR4S2Q8NH73 311 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 BPESC1Q9GZL8 116 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CACFD1Q9UGQ2 172 aa16.03■□□□□ 0.16
TNFRSF1A-201ENST00000162749 FAM157AC9JC47 383 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 PAX9P55771 341 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 CLINT1Q14677 625 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ZNF295-AS1Q8N0V1 137 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 ST6GALNAC6Q969X2 333 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 RBMXL1Q96E39 390 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 RFNGQ9Y644 331 aa16.02■□□□□ 0.16
TNFRSF1A-201ENST00000162749 NBPF19A0A087WUL8 3843 aa16.02■□□□□ 0.15
TNFRSF1A-201ENST00000162749 IGHV2-26A0A0B4J1V2 119 aa16.02■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ZNF137PP52743 207 aa16.02■□□□□ 0.15
TNFRSF1A-201ENST00000162749 VKORC1L1Q8N0U8 176 aa16.02■□□□□ 0.15
TNFRSF1A-201ENST00000162749 ONECUT1Q9UBC0 465 aa16.02■□□□□ 0.15
TNFRSF1A-201ENST00000162749 LOC105371242A0A075B767 164 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SYNGR2O43760 224 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 IGHV2-5P01817 119 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 MMP9P14780 707 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 NQO2P16083 231 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 PRB3Q04118 309 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 DIAPH2-AS1Q14236 149 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SP5Q6BEB4 398 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SSX9Q7RTT3 188 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 TMEM186Q96B77 213 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 SCRT1Q9BWW7 348 aa16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 MRPL20Q9BYC9 149 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-201ENST00000162749 FAM90A26D6RGX4 464 aa16■□□□□ 0.15
TNFRSF1A-201ENST00000162749 IGLV1-47P01700 117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms