RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TNFRSF14Q92956 283 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 RHOVQ96L33 236 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 EPG5Q9HCE0 2579 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 A0A1W2PPH5 198 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 COL6A6A6NMZ7 2263 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 HAX1O00165 279 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 ARG1P05089 322 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 SLC38A11Q08AI6 406 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 SCGB1C1Q8TD33 95 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 RAB1CQ92928 201 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 PINX1Q96BK5 328 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 TIMD4Q96H15 378 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 SLC35D1Q9NTN3 355 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 PRH1P02810 166 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 CD5P06127 495 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 VDAC2P45880 294 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 VWC2Q2TAL6 325 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 CENPVQ7Z7K6 275 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 VKORC1L1Q8N0U8 176 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 LILRB2Q8N423 598 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 OSR1Q8TAX0 266 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 NEIL1Q96FI4 390 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM133Q9H2Q1 129 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM14BQ9NUH8 114 aa11.68□□□□□ -0.54
RTFDC1-201ENST00000023939 C1QL1O75973 258 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 TSPAN15O95858 294 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 IFNA17P01571 189 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 APOA2P02652 100 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 OR2B8PP59922 312 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 RUNX1Q01196 453 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 SP5Q6BEB4 398 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 LFNGQ8NES3 379 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 OR8B3Q8NGG8 313 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 OR8B2Q96RD0 313 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 MRPL20Q9BYC9 149 aaKnown RBP11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 TIMM9Q9Y5J7 89 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 NBASA2RRP1 2371 aa11.67□□□□□ -0.54
RTFDC1-201ENST00000023939 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 A0A1B0GW64 132 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 BTBD17A6NE02 478 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 H0YJW9 148 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 SNCAP37840 140 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 FHITP49789 147 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 SERF2P84101 59 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 ZNF616Q08AN1 781 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 AKR1C8PQ5T2L2 129 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 WDR25Q64LD2 544 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 ABHD12Q8N2K0 398 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 OR10X1Q8NGY0 326 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 FAM213BQ8TBF2 198 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 CLCC1Q96S66 551 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 BET1LQ9NYM9 111 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 TCF19Q9Y242 345 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 RNASEK-C17orf49H0YIS7 233 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 UPK2O00526 184 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 GOSR1O95249 250 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 IL3RAP26951 378 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 SRSF3P84103 164 aaKnown RBP11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 AVPI1Q5T686 147 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 NARFLQ9H6Q4 476 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
RTFDC1-201ENST00000023939 KMT2BQ9UMN6 2715 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 ZZEF1O43149 2961 aa11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 TRAV1-1A0A0B4J248 108 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms