RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MOSP00540 346 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 IGHV1-46P01743 117 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 CD74P04233 296 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 NPPCP23582 126 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 MST1P26927 711 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 GAS1P54826 345 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 RIGQ13278 110 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 RGP1Q92546 391 aaPredicted RBP8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 TMEM204Q9BSN7 226 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 SLC25A15Q9Y619 301 aa8.74□□□□□ -1.01
NIPAL3-201ENST00000003912 TICRRQ7Z2Z1 1910 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 LOC102723971A0A1B0GUV8 181 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 C1QTNF9P0C862 333 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 CCL1P22362 96 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 SPINK4O60575 86 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 FCGR2BP31994 310 aaPredicted RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 NHLH2Q02577 135 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 SOSTQ9BQB4 213 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 ICE1Q9Y2F5 2266 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 SDK2Q58EX2 2172 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 REG1AP05451 166 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 RPL7P18124 248 aaKnown RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 LAIR2Q6ISS4 152 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 IGFL3Q6UXB1 125 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 ZCCHC24Q8N2G6 241 aaKnown RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 TMEM18Q96B42 140 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 RRN3P1Q2M238 152 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 LGALSLQ3ZCW2 172 aaPredicted RBP8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 COX19Q49B96 90 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 DDB2Q92466 427 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 DUX5Q96PT3 197 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 FBXL15Q9H469 300 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 C5orf66Q9H5L9 145 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 SLC2A8Q9NY64 477 aa8.73□□□□□ -1.01
NIPAL3-201ENST00000003912 AMTP48728 403 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 ANAPC16Q96DE5 110 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 MFSD2BA6NFX1 497 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 FCN1O00602 326 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 CAMPP49913 170 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 PSG9Q00887 426 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 GPHA2Q96T91 129 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 LYNX1G3V0Z9 82 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 SNCGO76070 127 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 CRYGSP22914 178 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 HLA-DRB5Q30154 266 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 LYRM2Q9NU23 88 aaPredicted RBP8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 CACNA1GO43497 2377 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 PQLC2Q6ZP29 291 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 PRSS22Q9GZN4 317 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 TMEM133Q9H2Q1 129 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 ARID1AO14497 2285 aa8.72□□□□□ -1.01
NIPAL3-201ENST00000003912 ACAA1P09110 424 aaPredicted RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 ZP3P21754 424 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 SUMO1P63165 101 aaKnown RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 PRNTQ86SH4 94 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 H1FOOQ8IZA3 346 aaPredicted RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 OR5AU1Q8NGC0 362 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 FGFBP3Q8TAT2 258 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 ARPC1AQ92747 370 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 IGFBP3P17936 291 aaPredicted RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 FOXG1P55316 489 aaPredicted RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 B3GALT5-AS1P59052 145 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 SNRPD3P62318 126 aaKnown RBP8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 TMEM187Q14656 261 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 SMIM8Q96KF7 97 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 DNAJC4Q9NNZ3 241 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.01
NIPAL3-201ENST00000003912 CCL3L1P16619 93 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 COLCA1Q6ZS62 124 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 PTBP3O95758 552 aaKnown RBP8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 MELTFP08582 738 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 TSPOP30536 169 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 TCF15Q12870 199 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 MRPL30Q8TCC3 161 aaKnown RBP8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 MRPL20Q9BYC9 149 aaKnown RBP8.71□□□□□ -1.02
NIPAL3-201ENST00000003912 FCER1GP30273 86 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 SPANXN1Q5VSR9 72 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 LDLRAD3Q86YD5 345 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 TAF15Q92804 592 aaKnown RBP eCLIP8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 C19orf24Q9BVV8 132 aa8.7□□□□□ -1.02
NIPAL3-201ENST00000003912 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms