RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 USP21Q9UK80 565 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 SIK1P57059 783 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 F13A1P00488 732 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 AXDND1Q5T1B0 1012 aaPredicted RBP13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 LRRN4CLQ8ND94 238 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
RBFOX1-224ENST00000641259 EVCP57679 992 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 ERC1Q8IUD2 1116 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 CICQ96RK0 1608 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 IFIT2P09913 472 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 NDUFB9Q9Y6M9 179 aa13.72□□□□□ -0.21
RBFOX1-224ENST00000641259 LRRC24Q50LG9 513 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 ARFGAP3Q9NP61 516 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-224ENST00000641259 CCDC171Q6TFL3 1326 aa13.71□□□□□ -0.22
RBFOX1-224ENST00000641259 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.22
RBFOX1-224ENST00000641259 EDC3Q96F86 508 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 FRMD3A2A2Y4 597 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 MAP2K2P36507 400 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 LIG3P49916 1009 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 TNNI3KQ59H18 835 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 FPGT-TNNI3KV9GXZ4 949 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 GNG11P61952 73 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 BTAF1O14981 1849 aa13.7□□□□□ -0.22
RBFOX1-224ENST00000641259 CHGBP05060 677 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 RDXP35241 583 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 AK2P54819 239 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 GDAP1L1Q96MZ0 367 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 GLRX3O76003 335 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 KCNG1Q9UIX4 513 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
RBFOX1-224ENST00000641259 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 DBNDD2Q9BQY9 259 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 WWC2Q6AWC2 1192 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 AFF2P51816 1311 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 CCDC91Q7Z6B0 441 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
RBFOX1-224ENST00000641259 ME1P48163 572 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 COL4A1P02462 1669 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 RAD50Q92878 1312 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 CAMTA2O94983 1202 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 SERPINC1P01008 464 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 HINFPQ9BQA5 517 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
RBFOX1-224ENST00000641259 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 MYH3P11055 1940 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 TIMM10P62072 90 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 ZNF34Q8IZ26 560 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms