RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MAP3K11Q16584 847 aa14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 SIRT2Q8IXJ6 389 aa14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 ZNF594Q96JF6 807 aaPredicted RBP14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 PRMT6Q96LA8 375 aaPredicted RBP14.67□□□□□ -0.06
ERGIC3-220ENST00000640748 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 F8W031 263 aaPredicted RBP14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 HMMRO75330 724 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 NUCB1Q02818 461 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 LMBR1LQ6UX01 489 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 BACH2Q9BYV9 841 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 JAG2Q9Y219 1238 aa14.66□□□□□ -0.06
ERGIC3-220ENST00000640748 CLRN2A0PK11 232 aa14.65□□□□□ -0.06
ERGIC3-220ENST00000640748 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
ERGIC3-220ENST00000640748 FKBP1AP62942 108 aaKnown RBP14.65□□□□□ -0.06
ERGIC3-220ENST00000640748 CFAP100Q494V2 611 aa14.65□□□□□ -0.06
ERGIC3-220ENST00000640748 ZNF804AQ7Z570 1209 aa14.65□□□□□ -0.06
ERGIC3-220ENST00000640748 GRM8O00222 908 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 FKTNO75072 461 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 UBTFL1P0CB47 393 aaPredicted RBP14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 NBPF12Q5TAG4 269 aaPredicted RBP14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 FBXO46Q6PJ61 603 aaPredicted RBP14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 CHD1LQ86WJ1 897 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 SLC10A4Q96EP9 437 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 DCTPP1Q9H773 170 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 PPP2R3BQ9Y5P8 575 aa14.64□□□□□ -0.07
ERGIC3-220ENST00000640748 MANSC4A6NHS7 340 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 IGF2BP3O00425 579 aaKnown RBP eCLIP14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 GJA5P36382 358 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 ANKRD45Q5TZF3 282 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 LDHAL6AQ6ZMR3 332 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 WNK4Q96J92 1243 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 FAM205AQ6ZU69 1335 aa14.63□□□□□ -0.07
ERGIC3-220ENST00000640748 ECM29Q5VYK3 1845 aa14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 USP2O75604 605 aaPredicted RBP14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 ZBTB48P10074 688 aaPredicted RBP14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 ATP8B2P98198 1209 aa14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 TDRD7Q8NHU6 1098 aaKnown RBP14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 PUS3Q9BZE2 481 aaKnown RBP14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 LAMB1P07942 1786 aa14.62□□□□□ -0.07
ERGIC3-220ENST00000640748 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 ALDH1A1P00352 501 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 INHBEP58166 350 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 RASA3Q14644 834 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 SUPT20HL1Q3ZLR7 823 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 LNPKQ9C0E8 428 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 VEZTQ9HBM0 779 aa14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
ERGIC3-220ENST00000640748 MKI67P46013 3256 aaKnown RBP14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 MYO1BO43795 1136 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 GYG1P46976 350 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 CAP1Q01518 475 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 GRIK5Q16478 980 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 PRPF38BQ5VTL8 546 aaKnown RBP14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 SUCLG2Q96I99 432 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 FAM84BQ96KN1 310 aaPredicted RBP14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 PTPN18Q99952 460 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 CNNM1Q9NRU3 951 aa14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
ERGIC3-220ENST00000640748 CENPFP49454 3210 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 UBE4AQ14139 1066 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 OTOP1Q7RTM1 612 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 ZNF70Q9UC06 446 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 RIPOR2Q9Y4F9 1068 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 UTYO14607 1347 aa14.59□□□□□ -0.07
ERGIC3-220ENST00000640748 TESPA1A2RU30 521 aaPredicted RBP14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 HIBADHP31937 336 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 IREB2P48200 963 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 CRHR2Q13324 411 aa14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 TDRD3Q9H7E2 651 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 TTF2Q9UNY4 1162 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 OTOFQ9HC10 1997 aa14.58□□□□□ -0.08
ERGIC3-220ENST00000640748 RABL6Q3YEC7 729 aaPredicted RBP14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 ANKRD13AQ8IZ07 590 aa14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
ERGIC3-220ENST00000640748 VGLL2Q8N8G2 317 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms