RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 IGHMBP2P38935 993 aaKnown RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 TTC6Q86TZ1 520 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 LMTK3Q96Q04 1460 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF202O95125 648 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 SYTL4Q96C24 671 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 WDR19Q8NEZ3 1342 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 EYA2O00167 538 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 ATP2B3Q16720 1220 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 C17orf53Q8N3J3 647 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 GPR108Q9NPR9 543 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 CATIPQ7Z7H3 387 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 KRI1Q8N9T8 703 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 CHAMP1Q96JM3 812 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 RUFY1Q96T51 708 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ARFGAP3Q9NP61 516 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 NPHP4O75161 1426 aaPredicted RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 E7EWF7 191 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC175P0C221 793 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 SCRN1Q12765 414 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 SARM1Q6SZW1 724 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 NOC3LQ8WTT2 800 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ALG1Q9BT22 464 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 TRMT1Q9NXH9 659 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 KIAA1468Q9P260 1216 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 MRC1P22897 1456 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 SLC39A6Q13433 755 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ANO1Q5XXA6 986 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 DBNLQ9UJU6 430 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 V9GYY5 206 aaPredicted RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 GOLGA8AA7E2F4 631 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 BIN1O00499 593 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 TUBBP07437 444 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ATG3Q9NT62 314 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 UTYO14607 1347 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ADAMTSL3P82987 1691 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 PHLPP1O60346 1717 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 MYL5Q02045 173 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 DMTNQ08495 405 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 UTP14CQ5TAP6 766 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF652Q9Y2D9 606 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 LAMB2P55268 1798 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 DLEC1Q9Y238 1755 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 CTAGE9A4FU28 777 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 YEATS4O95619 227 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 LIG1P18858 919 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 RBM6P78332 1123 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 NUTM2AQ8IVF1 878 aaPredicted RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 TMEM87BQ96K49 555 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 RILPL1Q5EBL4 403 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF589Q86UQ0 364 aaPredicted RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 PLA2G4DQ86XP0 818 aa6.38□□□□□ -1.39
SCN3A-210ENST00000640652 NAA15Q9BXJ9 866 aaKnown RBP6.38□□□□□ -1.39
SCN3A-210ENST00000640652 JAK2O60674 1132 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 GUCY1B3Q02153 619 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ZMYM6O95789 1325 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 HAND2P61296 217 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 IQCA1Q86XH1 822 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 APPBP2Q92624 585 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 BCL11BQ9C0K0 894 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 IFNKQ9P0W0 207 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 TAF1P21675 1872 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ADAMTS7Q9UKP4 1686 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ERVV-2B6SEH9 535 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 IFIT3O14879 490 aaKnown RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 KIF5BP33176 963 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 PPP2R5BQ15173 497 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 PROSER3Q2NL68 480 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 SETQ01105 290 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 RTN1Q16799 776 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 KCNB2Q92953 911 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 PCMTD1Q96MG8 357 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF287Q9HBT7 754 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 A0A1B0GVL5 298 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ARHGAP6O43182 974 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ARHGEF25Q86VW2 580 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 CNGA4Q8IV77 575 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 RGS22Q8NE09 1264 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC148Q8NFR7 591 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 SPDYE4A6NLX3 237 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 HSPD1P10809 573 aaKnown RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 WTAPQ15007 396 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 CCDC129Q6ZRS4 1044 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 FAM177A1Q8N128 213 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 TUBB2AQ13885 445 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ZMYM1Q5SVZ6 1142 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 ZNF496Q96IT1 587 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-210ENST00000640652 TUBB2BQ9BVA1 445 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 STRN4Q9NRL3 753 aa6.37□□□□□ -1.39
SCN3A-210ENST00000640652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms